RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ATP4AP20648 1035 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 PTGS1P23219 599 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 SP4Q02446 784 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 CYP4A11Q02928 519 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 CTTNQ14247 550 aaKnown RBP12.58□□□□□ -0.4
TRAF4-206ENST00000454852 XKR3Q5GH77 459 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 TPH2Q8IWU9 490 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
TRAF4-206ENST00000454852 RAD54LQ92698 747 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 TSEN34Q9BSV6 310 aaKnown RBP12.58□□□□□ -0.4
TRAF4-206ENST00000454852 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 TNMDQ9H2S6 317 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 KBTBD4Q9NVX7 518 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 ERAP1Q9NZ08 941 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 DNM3Q9UQ16 869 aa12.58□□□□□ -0.4
TRAF4-206ENST00000454852 MYH9P35579 1960 aaKnown RBP12.58□□□□□ -0.4
TRAF4-206ENST00000454852 BACH1O14867 736 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 ZEB2O60315 1214 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 KINO60870 393 aaKnown RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 OATP04181 439 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 CCL5P13501 91 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 YWHABP31946 246 aaKnown RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 STAT6P42226 847 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 PURAQ00577 322 aaKnown RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 PRKCEQ02156 737 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 ANO5Q75V66 913 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 OTUD6AQ7L8S5 288 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 KCNK18Q7Z418 384 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 RNF180Q86T96 592 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 PDILTQ8N807 584 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 SYT2Q8N9I0 419 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 PCSK9Q8NBP7 692 aaKnown RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 RASSF8Q8NHQ8 419 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 LARP4BQ92615 738 aaKnown RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 KAT2BQ92831 832 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 CCDC34Q96HJ3 373 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 DACT1Q9NYF0 836 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-206ENST00000454852 OGDHLQ9ULD0 1010 aa12.57□□□□□ -0.4
TRAF4-206ENST00000454852 COL1A2P08123 1366 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 SCN10AQ9Y5Y9 1956 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 ARID2Q68CP9 1835 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 MYADML2A6NDP7 307 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 MOXD2PA6NHM9 499 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 E9PMD0 336 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 H3BRB1 525 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 SORBS3O60504 671 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 CABYRO75952 493 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 C6orf222P0C671 652 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-206ENST00000454852 RARRES1P49788 294 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 SLC12A3P55017 1021 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 PSMC6P62333 389 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-206ENST00000454852 PLCB4Q15147 1175 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 LRRC41Q15345 812 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 MTFR1Q15390 333 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 TARBP2Q15633 366 aaKnown RBP12.56□□□□□ -0.4
TRAF4-206ENST00000454852 GNASQ5JWF2 1037 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 ARRDC4Q8NCT1 418 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 GLG1Q92896 1179 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 DHX58Q96C10 678 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 MTRQ99707 1265 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 MTG1Q9BT17 334 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-206ENST00000454852 KATNAL1Q9BW62 490 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 PANK2Q9BZ23 570 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 LRRC27Q9C0I9 530 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 TUT1Q9H6E5 874 aaKnown RBP12.56□□□□□ -0.4
TRAF4-206ENST00000454852 NRBP2Q9NSY0 501 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 SERTAD1Q9UHV2 236 aa12.56□□□□□ -0.4
TRAF4-206ENST00000454852 HBP1O60381 514 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 PGK1P00558 417 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 GJB1P08034 283 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 PLA2G4BP0C869 781 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 HOXC8P31273 242 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 AMPD3Q01432 767 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 ZNF484Q5JVG2 852 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 UTP14CQ5TAP6 766 aaKnown RBP12.55□□□□□ -0.4
TRAF4-206ENST00000454852 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
TRAF4-206ENST00000454852 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 TRIM50Q86XT4 487 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 CNNM3Q8NE01 707 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 PAGE5Q96GU1 130 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 TIPINQ9BVW5 301 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 SEZ6LQ9BYH1 1024 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 RNF208Q9H0X6 261 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 BHMT2Q9H2M3 363 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 CLSTN2Q9H4D0 955 aa12.55□□□□□ -0.4
TRAF4-206ENST00000454852 ZBTB42B2RXF5 422 aa12.54□□□□□ -0.4
TRAF4-206ENST00000454852 DNM1LO00429 736 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms