RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CEP63Q96MT8 703 aa15.04■□□□□ -0
CLK3-203ENST00000454830 CSADQ9Y600 493 aa15.04■□□□□ -0
CLK3-203ENST00000454830 RRP9O43818 475 aaKnown RBP15.04■□□□□ -0
CLK3-203ENST00000454830 PEX10O60683 326 aa15.04■□□□□ -0
CLK3-203ENST00000454830 HIRAP54198 1017 aaPredicted RBP15.04■□□□□ -0
CLK3-203ENST00000454830 GADL1Q6ZQY3 521 aa15.04■□□□□ -0
CLK3-203ENST00000454830 JAKMIP2Q96AA8 810 aa15.04■□□□□ -0
CLK3-203ENST00000454830 RIT2Q99578 217 aa15.04■□□□□ -0
CLK3-203ENST00000454830 DNAJC7Q99615 494 aa15.04■□□□□ -0
CLK3-203ENST00000454830 PSME4Q14997 1843 aa15.04■□□□□ -0
CLK3-203ENST00000454830 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
CLK3-203ENST00000454830 PPP1R12BO60237 982 aaPredicted RBP15.03■□□□□ -0
CLK3-203ENST00000454830 NR3C1P04150 777 aa15.03■□□□□ -0
CLK3-203ENST00000454830 XRCC5P13010 732 aaKnown RBP15.03■□□□□ -0
CLK3-203ENST00000454830 GAP43P17677 238 aa15.03■□□□□ -0
CLK3-203ENST00000454830 MRPS9P82933 396 aaKnown RBP15.03■□□□□ -0
CLK3-203ENST00000454830 KCNH2Q12809 1159 aa15.03■□□□□ -0
CLK3-203ENST00000454830 WDR59Q6PJI9 974 aa15.03■□□□□ -0
CLK3-203ENST00000454830 STXBP4Q6ZWJ1 553 aa15.03■□□□□ -0
CLK3-203ENST00000454830 SPAG5Q96R06 1193 aa15.03■□□□□ -0
CLK3-203ENST00000454830 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
CLK3-203ENST00000454830 PCDHA2Q9Y5H9 948 aa15.03■□□□□ -0
CLK3-203ENST00000454830 K7ENM7 598 aa15.03■□□□□ -0
CLK3-203ENST00000454830 PPP2R3AQ06190 1150 aa15.03■□□□□ -0
CLK3-203ENST00000454830 PGM5Q15124 567 aa15.03■□□□□ -0
CLK3-203ENST00000454830 XKR9Q5GH70 373 aa15.03■□□□□ -0
CLK3-203ENST00000454830 MAP7D2Q96T17 732 aa15.03■□□□□ -0
CLK3-203ENST00000454830 SGIP1Q9BQI5 828 aa15.03■□□□□ -0
CLK3-203ENST00000454830 PDCD2LQ9BRP1 358 aa15.03■□□□□ -0
CLK3-203ENST00000454830 ADM5C9JUS6 153 aa15.03■□□□□ -0
CLK3-203ENST00000454830 HIP1RO75146 1068 aa15.03■□□□□ -0
CLK3-203ENST00000454830 P4HBP07237 508 aaKnown RBP15.03■□□□□ -0
CLK3-203ENST00000454830 ZCWPW2Q504Y3 356 aa15.03■□□□□ -0
CLK3-203ENST00000454830 KLRG1Q96E93 195 aa15.03■□□□□ -0
CLK3-203ENST00000454830 KCTD10Q9H3F6 313 aa15.03■□□□□ -0
CLK3-203ENST00000454830 GINM1Q9NU53 330 aa15.03■□□□□ -0
CLK3-203ENST00000454830 ENC1O14682 589 aa15.02■□□□□ -0
CLK3-203ENST00000454830 FANCGO15287 622 aa15.02■□□□□ -0
CLK3-203ENST00000454830 EIF4A3P38919 411 aaKnown RBP15.02■□□□□ -0
CLK3-203ENST00000454830 CASP4P49662 377 aa15.02■□□□□ -0
CLK3-203ENST00000454830 ITGB3BPQ13352 177 aaPredicted RBP15.02■□□□□ -0
CLK3-203ENST00000454830 MTERF4Q7Z6M4 381 aaKnown RBP15.02■□□□□ -0
CLK3-203ENST00000454830 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
CLK3-203ENST00000454830 FAM170AA1A519 330 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 KRT86O43790 486 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 ATP9AO75110 1047 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 NR3C2P08235 984 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 KIF5AQ12840 1032 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 PCNX4Q63HM2 1172 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 PPP4R3CPQ6ZMV5 832 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 ANKRD35Q8N283 1001 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 ANKRD13CQ8N6S4 541 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 AGO4Q9HCK5 861 aaKnown RBP15.02□□□□□ -0.01
CLK3-203ENST00000454830 JADE2Q9NQC1 790 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 PXMP2Q9NR77 195 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 RASSF10A6NK89 507 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 BACH1O14867 736 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 QARSP47897 775 aaKnown RBP15.02□□□□□ -0.01
CLK3-203ENST00000454830 C1orf186Q6ZWK4 172 aa15.02□□□□□ -0.01
CLK3-203ENST00000454830 TYW1Q9NV66 732 aaKnown RBP15.02□□□□□ -0.01
CLK3-203ENST00000454830 CCDC169A6NNP5 214 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 FAM102BQ5T8I3 360 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 NAPGQ99747 312 aaPredicted RBP15.01□□□□□ -0.01
CLK3-203ENST00000454830 PDCL3Q9H2J4 239 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 SIK3Q9Y2K2 1263 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 C19orf81C9J6K1 198 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 CCND2P30279 289 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 NPEPPSP55786 919 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 PLA2G4FQ68DD2 849 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 IFIH1Q9BYX4 1025 aaKnown RBP15.01□□□□□ -0.01
CLK3-203ENST00000454830 PCIF1Q9H4Z3 704 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 L2HGDHQ9H9P8 463 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 PDXKO00764 312 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 EXOC3O60645 756 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 ACTN1P12814 892 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 HOXA7P31268 230 aaPredicted RBP15.01□□□□□ -0.01
CLK3-203ENST00000454830 DSG3P32926 999 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 EDRF1Q3B7T1 1238 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 TEX13BQ9BXU2 312 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 EPC1Q9H2F5 836 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 TBC1D22BQ9NU19 505 aa15.01□□□□□ -0.01
CLK3-203ENST00000454830 LARSQ9P2J5 1176 aaKnown RBP15.01□□□□□ -0.01
CLK3-203ENST00000454830 AKAP3O75969 853 aa15□□□□□ -0.01
CLK3-203ENST00000454830 TMEM132BQ14DG7 1078 aa15□□□□□ -0.01
CLK3-203ENST00000454830 EAPPQ56P03 285 aaPredicted RBP15□□□□□ -0.01
CLK3-203ENST00000454830 SFMBT2Q5VUG0 894 aa15□□□□□ -0.01
CLK3-203ENST00000454830 UPF1Q92900 1129 aaKnown RBP eCLIP15□□□□□ -0.01
CLK3-203ENST00000454830 ELP3Q9H9T3 547 aa15□□□□□ -0.01
CLK3-203ENST00000454830 FRMD3A2A2Y4 597 aa15□□□□□ -0.01
CLK3-203ENST00000454830 CLSTN1O94985 981 aa15□□□□□ -0.01
CLK3-203ENST00000454830 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
CLK3-203ENST00000454830 DNA2P51530 1060 aa15□□□□□ -0.01
CLK3-203ENST00000454830 TRIM59Q8IWR1 403 aa15□□□□□ -0.01
CLK3-203ENST00000454830 FAM186BQ8IYM0 893 aa15□□□□□ -0.01
CLK3-203ENST00000454830 NSUN6Q8TEA1 469 aaKnown RBP15□□□□□ -0.01
CLK3-203ENST00000454830 TTYH3Q9C0H2 523 aa15□□□□□ -0.01
CLK3-203ENST00000454830 HAUS4Q9H6D7 363 aa15□□□□□ -0.01
CLK3-203ENST00000454830 HOXC10Q9NYD6 342 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms