RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 NONOQ15233 471 aaKnown RBP eCLIP12.09□□□□□ -0.472e-7■■■□□ 16.3
DDX39A-203ENST00000454233 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 MTHFD1LQ6UB35 978 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 KRT25Q7Z3Z0 450 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 MICALL1Q8N3F8 863 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 NME8Q8N427 588 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 WASF1Q92558 559 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 AIFM3Q96NN9 605 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 RIT2Q99578 217 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 OSBPL7Q9BZF2 842 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 MICAL3Q7RTP6 2002 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 PTPRSQ13332 1948 aa12.09□□□□□ -0.47
DDX39A-203ENST00000454233 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 SMIM35A0A1B0GVV1 85 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 LCHNA4D1U4 455 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 RFXAPO00287 272 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 MSH4O15457 936 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 ARHGEF15O94989 841 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 UPP2O95045 317 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 KLRC1P26715 233 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 NEK4P51957 841 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 LPIN1Q14693 890 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 CCDC85BQ15834 202 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-203ENST00000454233 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 LRCH2Q5VUJ6 765 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 TSHZ1Q6ZSZ6 1077 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-203ENST00000454233 TOP1MTQ969P6 601 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 LENG9Q96B70 501 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 ZBTB10Q96DT7 871 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 IL17RAQ96F46 866 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 FAM167AQ96KS9 214 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 TGS1Q96RS0 853 aaKnown RBP12.08□□□□□ -0.48
DDX39A-203ENST00000454233 YME1L1Q96TA2 773 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 TEKT3Q9BXF9 490 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 TSPYL2Q9H2G4 693 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-203ENST00000454233 DISC1Q9NRI5 854 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 ORC3Q9UBD5 711 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-203ENST00000454233 GABBR1Q9UBS5 961 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 KCNJ14Q9UNX9 436 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 MAFBQ9Y5Q3 323 aaPredicted RBP12.08□□□□□ -0.48
DDX39A-203ENST00000454233 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
DDX39A-203ENST00000454233 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.07□□□□□ -0.48
DDX39A-203ENST00000454233 LINC01553A4QN01 128 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 M0R2N6 131 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 CHMP2AO43633 222 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 TDP2O95551 362 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
DDX39A-203ENST00000454233 CYP3A7P24462 503 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 SFNP31947 248 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 JAK3P52333 1124 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 HTRA4P83105 476 aaPredicted RBP12.07□□□□□ -0.48
DDX39A-203ENST00000454233 TMEM62Q0P6H9 643 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 NPY5RQ15761 445 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 Q4G0T1 1027 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 MOXD1Q6UVY6 613 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 TRMT1LQ7Z2T5 733 aaKnown RBP12.07□□□□□ -0.48
DDX39A-203ENST00000454233 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 CELF4Q9BZC1 486 aaKnown RBP12.07□□□□□ -0.48
DDX39A-203ENST00000454233 CEP131Q9UPN4 1083 aa12.07□□□□□ -0.48
DDX39A-203ENST00000454233 EPOPA6NHQ4 379 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 EDIL3O43854 480 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 ATP4AP20648 1035 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 CD52P31358 61 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 ERVK-21P61565 698 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 GRB10Q13322 594 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 INF2Q27J81 1249 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 MIER3Q7Z3K6 550 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 NECAB1Q8N987 351 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 RDM1Q8NG50 284 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 NAP1L4Q99733 375 aaKnown RBP12.06□□□□□ -0.48
DDX39A-203ENST00000454233 FTHL17Q9BXU8 183 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 NRBP2Q9NSY0 501 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 THEGQ9P2T0 379 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
DDX39A-203ENST00000454233 MTUS1Q9ULD2 1270 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 MTCH2Q9Y6C9 303 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 MYH9P35579 1960 aaKnown RBP12.06□□□□□ -0.48
DDX39A-203ENST00000454233 IGSF9BQ9UPX0 1349 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 KDM3AQ9Y4C1 1321 aa12.06□□□□□ -0.48
DDX39A-203ENST00000454233 CHD9Q3L8U1 2897 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 ENPP3O14638 875 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 MAGEB2O15479 319 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 PSMD10O75832 226 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 CTDNEP1O95476 244 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 SEC24BO95487 1268 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 C22orf31O95567 290 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 OATP04181 439 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 GCFC2P16383 781 aaKnown RBP12.05□□□□□ -0.48
DDX39A-203ENST00000454233 PAK2Q13177 524 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 SKIV2LQ15477 1246 aaKnown RBP12.05□□□□□ -0.48
DDX39A-203ENST00000454233 ME3Q16798 604 aa12.05□□□□□ -0.48
DDX39A-203ENST00000454233 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms