RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 SPDYE3A6NKU9 549 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 STAG3L1P0CL83 205 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 CALM1P0DP23 149 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 CALM2P0DP24 149 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 CALM3P0DP25 149 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 LIFRP42702 1097 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 IGBP1P78318 339 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 TEX2Q8IWB9 1127 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 CMTR1Q8N1G2 835 aaKnown RBP13.36□□□□□ -0.27
HERC3-207ENST00000452979 KLHL23Q8NBE8 558 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 PPP2R3CQ969Q6 453 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 ZBTB10Q96DT7 871 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
HERC3-207ENST00000452979 JPH1Q9HDC5 661 aaPredicted RBP13.36□□□□□ -0.27
HERC3-207ENST00000452979 TRPV2Q9Y5S1 764 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 NFASCO94856 1347 aa13.36□□□□□ -0.27
HERC3-207ENST00000452979 SMIM35A0A1B0GVV1 85 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 LOC730098B7Z3J9 87 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 SH2B2O14492 632 aaPredicted RBP13.35□□□□□ -0.27
HERC3-207ENST00000452979 PRC1O43663 620 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 ATG7O95352 703 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 MCM5P33992 734 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 NDUFV1P49821 464 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 CBX2Q14781 532 aaPredicted RBP13.35□□□□□ -0.27
HERC3-207ENST00000452979 PLCB4Q15147 1175 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 UBE2SQ16763 222 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 ADGRD2Q7Z7M1 963 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 SMRP1Q8NCR6 262 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 POF1BQ8WVV4 589 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 MXRA8Q9BRK3 442 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 FAM49AQ9H0Q0 323 aaPredicted RBP13.35□□□□□ -0.27
HERC3-207ENST00000452979 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 KCNH7Q9NS40 1196 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 PKD2L1Q9P0L9 805 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 SLC9A2Q9UBY0 812 aa13.35□□□□□ -0.27
HERC3-207ENST00000452979 RBM8AQ9Y5S9 174 aaKnown RBP13.35□□□□□ -0.27
HERC3-207ENST00000452979 FNDC1Q4ZHG4 1894 aaPredicted RBP13.35□□□□□ -0.27
HERC3-207ENST00000452979 CCDC69A6NI79 296 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 M0QZ92 97 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 SCG2P13521 617 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 SLC26A2P50443 739 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 STAT5BP51692 787 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 ACTR2P61160 394 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 UBE3AQ05086 875 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 TMEM62Q0P6H9 643 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 PAK2Q13177 524 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 TECTAO75443 2155 aa13.34□□□□□ -0.27
HERC3-207ENST00000452979 IGKV6D-21A0A0A0MT36 114 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 GLP2RO95838 553 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 NRIP1P48552 1158 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.28
HERC3-207ENST00000452979 KRT76Q01546 638 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 PKN1Q16512 942 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 PAN2Q504Q3 1202 aaKnown RBP13.33□□□□□ -0.28
HERC3-207ENST00000452979 MTHFD1LQ6UB35 978 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 FANCBQ8NB91 859 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 CYP2W1Q8TAV3 490 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 SDF4Q9BRK5 362 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 RGS18Q9NS28 235 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
HERC3-207ENST00000452979 TRPC6Q9Y210 931 aa13.33□□□□□ -0.28
HERC3-207ENST00000452979 hCG_1642624A0A1W2PR95 340 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 MEIS1O00470 390 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 ARP10275 920 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 RXRAP19793 462 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 GATMP50440 423 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 ITGB3BPQ13352 177 aaPredicted RBP13.32□□□□□ -0.28
HERC3-207ENST00000452979 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
HERC3-207ENST00000452979 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 ATP8B4Q8TF62 1192 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 TLE6Q9H808 572 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 AGO4Q9HCK5 861 aaKnown RBP13.32□□□□□ -0.28
HERC3-207ENST00000452979 ERVK-5Q9HDB9 667 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 RIC8AQ9NPQ8 531 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 LRFN2Q9ULH4 789 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 SLC12A7Q9Y666 1083 aa13.32□□□□□ -0.28
HERC3-207ENST00000452979 FSD2A1L4K1 749 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 TMEM221A6NGB7 291 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 M0R296 226 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 CSPG5O95196 566 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
HERC3-207ENST00000452979 ATF7P17544 494 aaPredicted RBP13.31□□□□□ -0.28
HERC3-207ENST00000452979 KLRC1P26715 233 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 FAM189BP81408 668 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 ZXDAP98168 799 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 NFX1Q12986 1120 aaKnown RBP13.31□□□□□ -0.28
HERC3-207ENST00000452979 CEP55Q53EZ4 464 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 PDE12Q6L8Q7 609 aaKnown RBP13.31□□□□□ -0.28
HERC3-207ENST00000452979 ABHD15Q6UXT9 468 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 TMEM184AQ6ZMB5 413 aa13.31□□□□□ -0.28
HERC3-207ENST00000452979 SLC24A5Q71RS6 500 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms