RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 NPLOC4Q8TAT6 608 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 ETNPPLQ8TBG4 499 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 MAP7D2Q96T17 732 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 ZMYND15Q9H091 742 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 SEMA6BQ9H3T3 888 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 ACAD9Q9H845 621 aa11.9□□□□□ -0.5
PKP4-206ENST00000452162 FANCGO15287 622 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 TPM1P09493 284 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 GRK4P32298 578 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 RGS2P41220 211 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 KCTD2Q14681 263 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 DYMQ7RTS9 669 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 DPP9Q86TI2 863 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 SLFN12Q8IYM2 578 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 ABRAQ8N0Z2 381 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 DDX12PQ92771 950 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 LENG9Q96B70 501 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 DNAJC19Q96DA6 116 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 ABHD8Q96I13 439 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 NT5C3AQ9H0P0 336 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 SLC39A2Q9NP94 309 aa11.9□□□□□ -0.51
PKP4-206ENST00000452162 MAGEC2Q9UBF1 373 aaPredicted RBP11.9□□□□□ -0.51
PKP4-206ENST00000452162 PIK3CDO00329 1044 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 NFIBO00712 420 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 TBX3O15119 743 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 CIITAP33076 1130 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 SPIRE1Q08AE8 756 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 MTERF4Q7Z6M4 381 aaKnown RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 CREBRFQ8IUR6 639 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 FAM114A1Q8IWE2 563 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 ANKRD35Q8N283 1001 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 GUF1Q8N442 669 aaKnown RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 TRIB2Q92519 343 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 APBA2Q99767 749 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 DESI2Q9BSY9 194 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 A1CFQ9NQ94 594 aaKnown RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 FLRT1Q9NZU1 646 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 FBXO40Q9UH90 709 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 MYCP01106 439 aaPredicted RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 HOXC6P09630 235 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 XRCC5P13010 732 aaKnown RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 TRIM32Q13049 653 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 PSMD2Q13200 908 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 HSP90AA2PQ14568 343 aaPredicted RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■■□ 25.5
PKP4-206ENST00000452162 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 CNOT6LQ96LI5 555 aaKnown RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 DNAI1Q9UI46 699 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 ZNF215Q9UL58 517 aaPredicted RBP11.89□□□□□ -0.51
PKP4-206ENST00000452162 ADGRG1Q9Y653 693 aa11.89□□□□□ -0.51
PKP4-206ENST00000452162 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
PKP4-206ENST00000452162 SPDYE3A6NKU9 549 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 CYP3A4P08684 503 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 DNM2P50570 870 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 PRR16Q569H4 304 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 SLAIN1Q8ND83 568 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 UIMC1Q96RL1 719 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
PKP4-206ENST00000452162 MRPL44Q9H9J2 332 aaKnown RBP11.88□□□□□ -0.51
PKP4-206ENST00000452162 MKI67P46013 3256 aaKnown RBP11.88□□□□□ -0.51
PKP4-206ENST00000452162 RBBP6Q7Z6E9 1792 aaKnown RBP11.88□□□□□ -0.51
PKP4-206ENST00000452162 DNAJC25-GNG10A0A024R161 153 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 B4DLN1 442 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 FAM86B1E9PN63 330 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 MED24O75448 989 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
PKP4-206ENST00000452162 CCDC175P0C221 793 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 FAM86B2P0C5J1 330 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 TRAF1Q13077 416 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 ZNF792Q3KQV3 632 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 FOXR2Q6PJQ5 311 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 E9PMD0 336 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 IDEP14735 1019 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 HOXA13P31271 388 aaPredicted RBP11.87□□□□□ -0.51
PKP4-206ENST00000452162 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 COASYQ13057 564 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 NAA30Q147X3 362 aaPredicted RBP11.87□□□□□ -0.51
PKP4-206ENST00000452162 MTFR1Q15390 333 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 MIIPQ5JXC2 388 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 TMTC1Q8IUR5 882 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 ZNF333Q96JL9 665 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 FAM20AQ96MK3 541 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 PURBQ96QR8 312 aaKnown RBP11.87□□□□□ -0.51
PKP4-206ENST00000452162 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 ABCB11O95342 1321 aa11.87□□□□□ -0.51
PKP4-206ENST00000452162 TTC26A0AVF1 554 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 HMGCRP04035 888 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 INHAP05111 366 aa11.86□□□□□ -0.51
PKP4-206ENST00000452162 PLA2G4BP0C869 781 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms