RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 TANC1Q9C0D5 1861 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 WDR64B1ANS9 1081 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 TBX3O15119 743 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 GAS7O60861 476 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 PSAPP07602 524 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 SPIRE1Q08AE8 756 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 UGCGQ16739 394 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 FAM160B1Q5W0V3 765 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 PDXDC2PQ6P474 469 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 CEP89Q96ST8 783 aa18.21■□□□□ 0.51
SCAMP4-205ENST00000452128 TMEM265A0A087WTH1 108 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 EML1O00423 815 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 BACH1O14867 736 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 BAIAP3O94812 1187 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 SFNP31947 248 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 PPP2R5CQ13362 524 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 TARBP2Q15633 366 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 CNKSR3Q6P9H4 555 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 MTHFD1LQ6UB35 978 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 KIAA0319LQ8IZA0 1049 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 DBF4BQ8NFT6 615 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 PHOSPHO2Q8TCD6 241 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 GUCD1Q96NT3 240 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 TEKT3Q9BXF9 490 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 FTOQ9C0B1 505 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 UPF2Q9HAU5 1272 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 GABBR1Q9UBS5 961 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 YBX2Q9Y2T7 364 aaKnown RBP18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 SLC4A7Q9Y6M7 1214 aa18.2■□□□□ 0.5
SCAMP4-205ENST00000452128 SMIM35A0A1B0GVV1 85 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 ABHD14A-ACY1A0A1B0GW23 586 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 DNAJB2P25686 324 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 KLRC1P26715 233 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 JAK3P52333 1124 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 ZNF484Q5JVG2 852 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 DNAJB3Q8WWF6 145 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 BBXQ8WY36 941 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 TNPO1Q92973 898 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 MTMR9Q96QG7 549 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 MTIF3Q9H2K0 278 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 TRPC6Q9Y210 931 aa18.19■□□□□ 0.5
SCAMP4-205ENST00000452128 COL1A2P08123 1366 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 ST18O60284 1047 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 CCNT1O60563 726 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 C22orf31O95567 290 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 ACTN1P12814 892 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 WDR5P61964 334 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 IGBP1P78318 339 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 GUCY1B3Q02153 619 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 C8orf76Q96K31 380 aa18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 NAP1L4Q99733 375 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 FOXP1Q9H334 677 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-205ENST00000452128 CTSHP09668 335 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 MCM2P49736 904 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 FOSBP53539 338 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 RABGGTBP53611 331 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 LPIN1Q14693 890 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 FBXO47Q5MNV8 452 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 NME8Q8N427 588 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 NIFKQ9BYG3 293 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 BRMS1Q9HCU9 246 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 KDM3AQ9Y4C1 1321 aa18.17■□□□□ 0.5
SCAMP4-205ENST00000452128 KAT6AQ92794 2004 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 KIF28PB7ZC32 967 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 RPLP2P05387 115 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 MYOGP15173 224 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 DEFB103AP81534 67 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 MRPS6P82932 125 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 TRIM29Q14134 588 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 MIER3Q7Z3K6 550 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 HERC6Q8IVU3 1022 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 TIFAQ96CG3 184 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 SLC9A7Q96T83 725 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 AGO3Q9H9G7 860 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 WRAP73Q9P2S5 460 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 PCDHA11Q9Y5I1 949 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 CDY2AQ9Y6F7 541 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 SQORQ9Y6N5 450 aa18.16■□□□□ 0.5
SCAMP4-205ENST00000452128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 ZBBXA8MT70 800 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 CHMP2AO43633 222 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 OATP04181 439 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 PRKCEQ02156 737 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 CUL4AQ13619 759 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 IKBKEQ14164 716 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 C4orf32Q8N8J7 132 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 FAM167AQ96KS9 214 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 TMEM60Q9H2L4 133 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 CDHR5Q9HBB8 845 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 SAMM50Q9Y512 469 aa18.15■□□□□ 0.5
SCAMP4-205ENST00000452128 IGKV6-21A0A0C4DH24 114 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 EFCAB14O75071 495 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
SCAMP4-205ENST00000452128 TOB1P50616 345 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms