RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CASP4P49662 377 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 JAM2P57087 298 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 SETQ01105 290 aaPredicted RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 LRRC63Q05C16 580 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 PDAP1Q13442 181 aaKnown RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 NCAPH2Q6IBW4 605 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 KCTD17Q8N5Z5 321 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 DESI2Q9BSY9 194 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 HAPLN2Q9GZV7 340 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 NT5C3AQ9H0P0 336 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 ARHGAP20Q9P2F6 1191 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 TRIM10Q9UDY6 481 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 ADGRA2Q96PE1 1338 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 SYNGAP1Q96PV0 1343 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 COL4A4P53420 1690 aaPredicted RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 TISP43B9A030 160 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 SERPINC1P01008 464 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 RARRES1P49788 294 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 NCBP1Q09161 790 aaKnown RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 KRT79Q5XKE5 535 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 GPBP1Q86WP2 473 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 ANP32BQ92688 251 aaKnown RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 TRERF1Q96PN7 1200 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 BHMT2Q9H2M3 363 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 FAM53CQ9NYF3 392 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 WNT7BP56706 349 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 TTLL12Q14166 644 aaPredicted RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 Q3C1V9 767 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 ZC2HC1CQ53FD0 456 aaPredicted RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 LXNQ9BS40 222 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 XPNPEP1Q9NQW7 623 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 SPDYE3A6NKU9 549 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 FAM189A1O60320 539 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 ADSSP30520 456 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 PSEN1P49768 467 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 CDK17Q00537 523 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 LRCH2Q5VUJ6 765 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 ZNF720Q7Z2F6 126 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 CALML4Q96GE6 196 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 SPON1Q9HCB6 807 aa7.32□□□□□ -1.24
USP46-202ENST00000451218 DBR1Q9UK59 544 aaKnown RBP7.32□□□□□ -1.24
USP46-202ENST00000451218 EVPLQ92817 2033 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 SPATA31C2B4DYI2 1134 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 TXLNAP40222 546 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 EPHA7Q15375 998 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 EDRF1Q3B7T1 1238 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 VWA3BQ502W6 1294 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 C9orf131Q5VYM1 1079 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 ACRBPQ8NEB7 543 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 CDCA5Q96FF9 252 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 BAG1Q99933 345 aaPredicted RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 SH2D4AQ9H788 454 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 EXOC1Q9NV70 894 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 RBPJLQ9UBG7 517 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 R3HCC1Q9Y3T6 440 aaKnown RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 BACH1O14867 736 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 MEFVO15553 781 aaPredicted RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 ARHGAP6O43182 974 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 CBFA2T2O43439 604 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 FLOT1O75955 427 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 ARIH2O95376 493 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 ICAM3P32942 547 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 NCKAP1LP55160 1127 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 BAATQ14032 418 aaPredicted RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 ABHD15Q6UXT9 468 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 CSGALNACT2Q8N6G5 542 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 FAM133AQ8N9E0 248 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 MAF1Q9H063 256 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 ST6GALNAC4Q9H4F1 302 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 TRMT1Q9NXH9 659 aaKnown RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 TRIP11Q15643 1979 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 NFASCO94856 1347 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 PHLPP2Q6ZVD8 1323 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 C19orf81C9J6K1 198 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 ITGBL1O95965 494 aaPredicted RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 NMT1P30419 496 aaKnown RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 CNTN2Q02246 1040 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 TMEM266Q2M3C6 531 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 FAM26FQ5R3K3 315 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 SLC35C1Q96A29 364 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 ZNF577Q9BSK1 485 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 TBC1D7Q9P0N9 293 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 PPP1R1BQ9UD71 204 aaPredicted RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 SFI1A8K8P3 1242 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 GOLGA6L6A8MZA4 724 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 AKR1B15C9JRZ8 316 aaPredicted RBP7.31□□□□□ -1.24
USP46-202ENST00000451218 RAD21O60216 631 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 LACRTQ9GZZ8 138 aa7.31□□□□□ -1.24
USP46-202ENST00000451218 THSD7BQ9C0I4 1608 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 SFPQP23246 707 aaKnown RBP eCLIP7.3□□□□□ -1.24
USP46-202ENST00000451218 DHX8Q14562 1220 aaKnown RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 ARHGAP27Q6ZUM4 889 aa7.3□□□□□ -1.24
USP46-202ENST00000451218 CCDC60Q8IWA6 550 aaPredicted RBP7.3□□□□□ -1.24
USP46-202ENST00000451218 PRIMPOLQ96LW4 560 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms