RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 TRIOO75962 3097 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 ADAMTS3O15072 1205 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 SMIM10L2AP0DMW4 78 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 SMIM10L2BP0DMW5 78 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 TCF7P36402 384 aaPredicted RBP19.96■□□□□ 0.79
FAM3A-216ENST00000449971 SREBF1P36956 1147 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 ARHGAP4P98171 946 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 CEP55Q53EZ4 464 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 MCTP2Q6DN12 878 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 CPLX2Q6PUV4 134 aaKnown RBP19.96■□□□□ 0.79
FAM3A-216ENST00000449971 HFE2Q6ZVN8 426 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 TRIM50Q86XT4 487 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 SEPT1Q8WYJ6 367 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 TOP1MTQ969P6 601 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 VPS54Q9P1Q0 977 aa19.96■□□□□ 0.79
FAM3A-216ENST00000449971 ZNF215Q9UL58 517 aaPredicted RBP19.96■□□□□ 0.79
FAM3A-216ENST00000449971 POTEB3A0JP26 581 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 ARP10275 920 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 IRS1P35568 1242 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 MKRN4PQ13434 485 aaPredicted RBP19.95■□□□□ 0.78
FAM3A-216ENST00000449971 POTEBQ6S5H4 581 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 ADHFE1Q8IWW8 467 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 REXO1Q8N1G1 1221 aaKnown RBP19.95■□□□□ 0.78
FAM3A-216ENST00000449971 CCDC148Q8NFR7 591 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 BICD2Q8TD16 824 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 IGFLR1Q9H665 355 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 MUTYHQ9UIF7 546 aa19.95■□□□□ 0.78
FAM3A-216ENST00000449971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-216ENST00000449971 GSTTP1A0A1W2PQM5 241 aa19.94■□□□□ 0.78
FAM3A-216ENST00000449971 MEIS1O00470 390 aa19.94■□□□□ 0.78
FAM3A-216ENST00000449971 NLRP5P59047 1200 aa19.94■□□□□ 0.78
FAM3A-216ENST00000449971 SDF4Q9BRK5 362 aa19.94■□□□□ 0.78
FAM3A-216ENST00000449971 SLKQ9H2G2 1235 aaPredicted RBP19.94■□□□□ 0.78
FAM3A-216ENST00000449971 RNPEPQ9H4A4 650 aa19.94■□□□□ 0.78
FAM3A-216ENST00000449971 PRKAG3Q9UGI9 489 aa19.94■□□□□ 0.78
FAM3A-216ENST00000449971 SEC24BO95487 1268 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 DLX2Q07687 328 aaPredicted RBP19.93■□□□□ 0.78
FAM3A-216ENST00000449971 FIBCD1Q8N539 461 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 RASGRP4Q8TDF6 673 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 GLG1Q92896 1179 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 AGO4Q9HCK5 861 aaKnown RBP19.93■□□□□ 0.78
FAM3A-216ENST00000449971 JPH1Q9HDC5 661 aaPredicted RBP19.93■□□□□ 0.78
FAM3A-216ENST00000449971 SH3GLB2Q9NR46 395 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 SETD4Q9NVD3 440 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 SLC9A2Q9UBY0 812 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 TPCN1Q9ULQ1 816 aa19.93■□□□□ 0.78
FAM3A-216ENST00000449971 GRM6O15303 877 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 DEXIO95424 95 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 CYP3A4P08684 503 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 GNAT1P11488 350 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 GTF2F1P35269 517 aaKnown RBP eCLIP19.92■□□□□ 0.78
FAM3A-216ENST00000449971 ANKRD1Q15327 319 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 PLA2G4DQ86XP0 818 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 IL17RAQ96F46 866 aa19.92■□□□□ 0.78
FAM3A-216ENST00000449971 C19orf67A6NJJ6 358 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 FAM86B1E9PN63 330 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 FAM86B2P0C5J1 330 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 LTBRP36941 435 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 AK2P54819 239 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 SCRN1Q12765 414 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 HYAL1Q12794 435 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 NIPA1Q7RTP0 329 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 MFSD14AQ96MC6 490 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 PHOX2BQ99453 314 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 SMARCAD1Q9H4L7 1026 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 NFASCO94856 1347 aa19.91■□□□□ 0.78
FAM3A-216ENST00000449971 NLRC5Q86WI3 1866 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 PFKFB2O60825 505 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 CDKL5O76039 1030 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 MARK3P27448 753 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 ACTR2P61160 394 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 ITGB3BPQ13352 177 aaPredicted RBP19.9■□□□□ 0.78
FAM3A-216ENST00000449971 CRYGNQ8WXF5 182 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 AZI2Q9H6S1 392 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 ERAP1Q9NZ08 941 aa19.9■□□□□ 0.78
FAM3A-216ENST00000449971 DDX39AO00148 427 aaKnown RBP19.89■□□□□ 0.77
FAM3A-216ENST00000449971 LINC01565O15544 149 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 MBTPS2O43462 519 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 GHRP10912 638 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 HOXC8P31273 242 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 NEK4P51957 841 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 RNF135Q8IUD6 432 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 AIFM3Q96NN9 605 aa19.89■□□□□ 0.77
FAM3A-216ENST00000449971 POP1Q99575 1024 aaKnown RBP19.89■□□□□ 0.77
FAM3A-216ENST00000449971 C11orf84Q9BUA3 381 aaPredicted RBP19.89■□□□□ 0.77
FAM3A-216ENST00000449971 NRCAMQ92823 1304 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 IGLV3-22A0A075B6J6 115 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 NCK2O43639 380 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 DTNBO60941 627 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 TBX10O75333 385 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 PPFIA1Q13136 1202 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 COL19A1Q14993 1142 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 SMAD2Q15796 467 aaKnown RBP19.88■□□□□ 0.77
FAM3A-216ENST00000449971 PRR16Q569H4 304 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 LMBR1Q8WVP7 490 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 APBB2Q92870 758 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 PCYT2Q99447 389 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 ZNF577Q9BSK1 485 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 KCNH6Q9H252 994 aa19.88■□□□□ 0.77
FAM3A-216ENST00000449971 PCDHA4Q9UN74 947 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms