RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
UBE3B-204ENST00000449510 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-204ENST00000449510 SCNN1DP51172 638 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 QPCTQ16769 361 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 ARMC2Q8NEN0 867 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 C1orf54Q8WWF1 131 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 OSBPL1AQ9BXW6 950 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 PITPNM3Q9BZ71 974 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 LRRC63Q05C16 580 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 DTX3LQ8TDB6 740 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 UBXN6Q9BZV1 441 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 TTC7AQ9ULT0 858 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-204ENST00000449510 PCDHA1Q9Y5I3 950 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 NCAPD2Q15021 1401 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 CNTNAP5Q8WYK1 1306 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 CCT8L1PA6NM43 557 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 FAM196BA6NMK8 535 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 IGF2BP3O00425 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
UBE3B-204ENST00000449510 UFL1O94874 794 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 BRAFP15056 766 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 KCNB1Q14721 858 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 RBBP5Q15291 538 aaKnown RBP13.43□□□□□ -0.26
UBE3B-204ENST00000449510 ANKRD20A3Q5VUR7 823 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 CUEDC2Q9H467 287 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
UBE3B-204ENST00000449510 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 SORBS3O60504 671 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 PBX1P40424 430 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 GSTO1P78417 241 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 RCN2Q14257 317 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 SFR1Q86XK3 245 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 UBE2TQ9NPD8 197 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 DONSONQ9NYP3 566 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 PPLO60437 1756 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 LGR5O75473 907 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 RPS6KA5O75582 802 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 GCFC2P16383 781 aaKnown RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 PDE6CP51160 858 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 RAD23BP54727 409 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 DDB1Q16531 1140 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 C6orf163Q5TEZ5 329 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 APTXQ7Z2E3 356 aaKnown RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 HIPK4Q8NE63 616 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 EPS8L3Q8TE67 593 aaKnown RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 OSGEPQ9NPF4 335 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 NEO1Q92859 1461 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 hCG_2014768A0A024R1R8 64 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 NKRFO15226 690 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 GNA14O95837 355 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 DLATP10515 647 aaKnown RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 BTDP43251 543 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 GALCP54803 685 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 IFI35P80217 286 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 SGO2Q562F6 1265 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 MFSD14BQ5SR56 506 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 KCNV1Q6PIU1 500 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 TPTE2Q6XPS3 522 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 SLC30A10Q6XR72 485 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 SEPT14Q6ZU15 432 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 TRPM8Q7Z2W7 1104 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 FAM178BQ8IXR5 827 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 HAUS1Q96CS2 278 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 IQCDQ96DY2 449 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 NT5C3AQ9H0P0 336 aa13.42□□□□□ -0.26
UBE3B-204ENST00000449510 CNOT10Q9H9A5 744 aaKnown RBP13.42□□□□□ -0.26
UBE3B-204ENST00000449510 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-204ENST00000449510 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-204ENST00000449510 ACCSLQ4AC99 568 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 GUF1Q8N442 669 aaKnown RBP13.41□□□□□ -0.26
UBE3B-204ENST00000449510 FBXO25Q8TCJ0 367 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 HOOK2Q96ED9 719 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 TSC22D3Q99576 134 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 DNAJC12Q9UKB3 198 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 KLRK1P26718 216 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 FLT3P36888 993 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 PPP4R3AQ6IN85 833 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 SH3RF1Q7Z6J0 888 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 KIAA0895Q8NCT3 520 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 GBP5Q96PP8 586 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 ERGIC2Q96RQ1 377 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 CCSER1Q9C0I3 900 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 GAS8O95995 478 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 HLA-DOAP06340 250 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 CSF1RP07333 972 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 CA4P22748 312 aa13.41□□□□□ -0.26
UBE3B-204ENST00000449510 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms