RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 ITIH3Q06033 890 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 NFX1Q12986 1120 aaKnown RBP8.35□□□□□ -1.07
HDLBP-222ENST00000449504 PPFIA1Q13136 1202 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 TDGQ13569 410 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 PGM5Q15124 567 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 ATAT1Q5SQI0 421 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 GPATCH4Q5T3I0 446 aaKnown RBP8.35□□□□□ -1.07
HDLBP-222ENST00000449504 FAM102BQ5T8I3 360 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 FCHSD1Q86WN1 690 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 COLGALT1Q8NBJ5 622 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 RASGRP4Q8TDF6 673 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 SLC39A7Q92504 469 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 MRPS27Q92552 414 aaKnown RBP8.35□□□□□ -1.07
HDLBP-222ENST00000449504 ZBTB10Q96DT7 871 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 GPR20Q99678 358 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 ZKSCAN3Q9BRR0 538 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 MAF1Q9H063 256 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 NGRNQ9NPE2 291 aaKnown RBP8.35□□□□□ -1.07
HDLBP-222ENST00000449504 CYP26B1Q9NR63 512 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 TYW1Q9NV66 732 aaKnown RBP8.35□□□□□ -1.07
HDLBP-222ENST00000449504 RTEL1Q9NZ71 1219 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 NCDNQ9UBB6 729 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 PADI3Q9ULW8 664 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 HCFC2Q9Y5Z7 792 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 MYH7P12883 1935 aa8.35□□□□□ -1.07
HDLBP-222ENST00000449504 SPDYE4A6NLX3 237 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 EOMESO95936 686 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 DCNP07585 359 aaKnown RBP8.34□□□□□ -1.07
HDLBP-222ENST00000449504 SP9P0CG40 484 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 SDHBP21912 280 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 PAK2Q13177 524 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
HDLBP-222ENST00000449504 NEDD9Q14511 834 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 GRIK4Q16099 956 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 TMEM266Q2M3C6 531 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 ZMYM1Q5SVZ6 1142 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 VPS53Q5VIR6 699 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 IER5Q5VY09 327 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 METTL7BQ6UX53 244 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 ACSF2Q96CM8 615 aaPredicted RBP8.34□□□□□ -1.07
HDLBP-222ENST00000449504 GPATCH3Q96I76 525 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 TTC14Q96N46 770 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 TCP11L1Q9NUJ3 509 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 TUBE1Q9UJT0 475 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
HDLBP-222ENST00000449504 CA14Q9ULX7 337 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 PCDHA1Q9Y5I3 950 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 GVINP1Q7Z2Y8 2422 aa8.34□□□□□ -1.07
HDLBP-222ENST00000449504 KMT2BQ9UMN6 2715 aaPredicted RBP8.34□□□□□ -1.07
HDLBP-222ENST00000449504 MYH7BA7E2Y1 1941 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 KIAA1217Q5T5P2 1943 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 NCOR2Q9Y618 2525 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 ZFHX4Q86UP3 3567 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 M0QZ92 97 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 FOXP2O15409 715 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 NARSO43776 548 aaKnown RBP8.33□□□□□ -1.08
HDLBP-222ENST00000449504 PBX3P40426 434 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 SARSP49591 514 aaKnown RBP8.33□□□□□ -1.08
HDLBP-222ENST00000449504 HSD17B4P51659 736 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 KRT17Q04695 432 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 GNPTABQ3T906 1256 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 VARS2Q5ST30 1063 aaKnown RBP8.33□□□□□ -1.08
HDLBP-222ENST00000449504 XRRA1Q6P2D8 792 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 TMC5Q6UXY8 1006 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 STOX1Q6ZVD7 989 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 TMEM87AQ8NBN3 555 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 TMX1Q9H3N1 280 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 JMJD4Q9H9V9 463 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 KCNK12Q9HB15 430 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 PLXNA4Q9HCM2 1894 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 DUSP12Q9UNI6 340 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 GINS2Q9Y248 185 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 LZTS1Q9Y250 596 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 TRPV2Q9Y5S1 764 aa8.33□□□□□ -1.08
HDLBP-222ENST00000449504 KIAA1671Q9BY89 1806 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 DENND3A2RUS2 1198 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 OPLAHO14841 1288 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 KINO60870 393 aaKnown RBP8.32□□□□□ -1.08
HDLBP-222ENST00000449504 CLASP2O75122 1294 aaKnown RBP8.32□□□□□ -1.08
HDLBP-222ENST00000449504 ADRB1P08588 477 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 FGRP09769 529 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 FGFR1P11362 822 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 LAG3P18627 525 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 TCF7P36402 384 aaPredicted RBP8.32□□□□□ -1.08
HDLBP-222ENST00000449504 HAND2P61296 217 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 PLCB3Q01970 1234 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 TBC1D8BQ0IIM8 1120 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 SMC1AQ14683 1233 aaKnown RBP8.32□□□□□ -1.08
HDLBP-222ENST00000449504 MARCH8Q5T0T0 291 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 KIAA1841Q6NSI8 718 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 MRPL43Q8N983 215 aaKnown RBP8.32□□□□□ -1.08
HDLBP-222ENST00000449504 SUMF1Q8NBK3 374 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 FEZF2Q8TBJ5 459 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 GLG1Q92896 1179 aa8.32□□□□□ -1.08
HDLBP-222ENST00000449504 ADAM2Q99965 735 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms