RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 FAM49AQ9H0Q0 323 aaPredicted RBP12.29□□□□□ -0.44
SRRT-205ENST00000449389 TBC1D22BQ9NU19 505 aa12.29□□□□□ -0.44
SRRT-205ENST00000449389 TRPV2Q9Y5S1 764 aa12.29□□□□□ -0.44
SRRT-205ENST00000449389 SIP14410 1827 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 XIRP2A4UGR9 3374 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 SMIM35A0A1B0GVV1 85 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 DHX15O43143 795 aaKnown RBP12.28□□□□□ -0.44
SRRT-205ENST00000449389 HBP1O60381 514 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 PDIA3P30101 505 aaKnown RBP12.28□□□□□ -0.44
SRRT-205ENST00000449389 KCNQ1P51787 676 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 PTPROQ16827 1216 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 EPC2Q52LR7 807 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 MIS18BP1Q6P0N0 1132 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 RUFY3Q7L099 469 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 TMEM192Q8IY95 271 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 NME8Q8N427 588 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 ATP8B4Q8TF62 1192 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 TRAPPC12Q8WVT3 735 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 ZBTB10Q96DT7 871 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 ZNF577Q9BSK1 485 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 SLC26A6Q9BXS9 759 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 ZSWIM6Q9HCJ5 1215 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 TCEAL9Q9UHQ7 104 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 COL1A2P08123 1366 aa12.28□□□□□ -0.44
SRRT-205ENST00000449389 MUC3AQ02505 3323 aa12.27□□□□□ -0.44
SRRT-205ENST00000449389 H3BNC9 293 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 ENPP3O14638 875 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 ADAMTS3O15072 1205 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 NEFLP07196 543 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 CD52P31358 61 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 CIITAP33076 1130 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 KRT76Q01546 638 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 ZNF484Q5JVG2 852 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 ZNF746Q6NUN9 644 aaPredicted RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 PDXDC2PQ6P474 469 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 MTHFD1LQ6UB35 978 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 FAM43BQ6ZT52 329 aaPredicted RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 CCDC60Q8IWA6 550 aaPredicted RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 SMAP1Q8IYB5 467 aaPredicted RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 TRIM22Q8IYM9 498 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 FIBCD1Q8N539 461 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 MRPL38Q96DV4 380 aaKnown RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 FTHL17Q9BXU8 183 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 CELF4Q9BZC1 486 aaKnown RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 TM6SF1Q9BZW5 370 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 AGO3Q9H9G7 860 aaKnown RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 NCOA5Q9HCD5 579 aaKnown RBP12.27□□□□□ -0.45
SRRT-205ENST00000449389 SH3GLB2Q9NR46 395 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 RWDD3Q9Y3V2 267 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 KDM3AQ9Y4C1 1321 aa12.27□□□□□ -0.45
SRRT-205ENST00000449389 PPFIA3O75145 1194 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 KLRC1P26715 233 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 CCT2P78371 535 aaKnown RBP12.26□□□□□ -0.45
SRRT-205ENST00000449389 TMEM62Q0P6H9 643 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 PAK2Q13177 524 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 GPM6BQ13491 265 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 TOB2Q14106 344 aaPredicted RBP12.26□□□□□ -0.45
SRRT-205ENST00000449389 TIGD5Q53EQ6 642 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 PRR16Q569H4 304 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 SWSAP1Q6NVH7 229 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 RASGRP4Q8TDF6 673 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 RC3H2Q9HBD1 1191 aaKnown RBP12.26□□□□□ -0.45
SRRT-205ENST00000449389 VPS54Q9P1Q0 977 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 ADGRA3Q8IWK6 1321 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 IGSF9BQ9UPX0 1349 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
SRRT-205ENST00000449389 CPLX1O14810 134 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 RB1P06400 928 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 PSAPP07602 524 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 CTNNB1P35222 781 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 NLRP5P59047 1200 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 SSRP1Q08945 709 aaKnown RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 CKAP2LQ8IYA6 745 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 LINC01599Q8WXQ3 324 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 ZNF274Q96GC6 653 aaPredicted RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 NECAB3Q96P71 396 aaPredicted RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 UIMC1Q96RL1 719 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 C11orf84Q9BUA3 381 aaPredicted RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 C22orf23Q9BZE7 217 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 UBE2ZQ9H832 354 aaPredicted RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 PADI3Q9ULW8 664 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 PCDHA10Q9Y5I2 948 aa12.25□□□□□ -0.45
SRRT-205ENST00000449389 MAFBQ9Y5Q3 323 aaPredicted RBP12.25□□□□□ -0.45
SRRT-205ENST00000449389 WDR64B1ANS9 1081 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 C5orf67F2Z3F1 127 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 DGKIO75912 1065 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 DEXIO95424 95 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 STAG3L1P0CL83 205 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 ATP4AP20648 1035 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 BMPR1AP36894 532 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 USP11P51784 963 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 BTG3Q14201 252 aaPredicted RBP12.24□□□□□ -0.45
SRRT-205ENST00000449389 ODR4Q5SWX8 454 aa12.24□□□□□ -0.45
SRRT-205ENST00000449389 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
SRRT-205ENST00000449389 RTN4RL1Q86UN2 441 aaPredicted RBP12.24□□□□□ -0.45
SRRT-205ENST00000449389 NPAS4Q8IUM7 802 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms