RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 CDCA5Q96FF9 252 aa17.78■□□□□ 0.44
AP000253.1-201ENST00000449339 CEP63Q96MT8 703 aa17.78■□□□□ 0.44
AP000253.1-201ENST00000449339 RIT2Q99578 217 aa17.78■□□□□ 0.44
AP000253.1-201ENST00000449339 ZMYND15Q9H091 742 aa17.78■□□□□ 0.44
AP000253.1-201ENST00000449339 REXO2Q9Y3B8 237 aaKnown RBP17.78■□□□□ 0.44
AP000253.1-201ENST00000449339 MRFAP1Q9Y605 127 aa17.78■□□□□ 0.44
AP000253.1-201ENST00000449339 ABL1P00519 1130 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 ARHGAP25P42331 645 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 EPHA7Q15375 998 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 CCDC40Q4G0X9 1142 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 ZNF569Q5MCW4 686 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 RINT1Q6NUQ1 792 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 SFR1Q86XK3 245 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 FAM207AQ9NSI2 230 aaPredicted RBP17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 PNMA2Q9UL42 364 aa17.77■□□□□ 0.44
AP000253.1-201ENST00000449339 SFI1A8K8P3 1242 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 ATP9AO75110 1047 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 OAZ1P54368 228 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 NIPA1Q7RTP0 329 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 OTUD5Q96G74 571 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 LXNQ9BS40 222 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 CARD6Q9BX69 1037 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 TEX13BQ9BXU2 312 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 GNA14O95837 355 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 TTLL12Q14166 644 aaPredicted RBP17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 GADL1Q6ZQY3 521 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 RBM46Q8TBY0 533 aaKnown RBP17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 ARID3AQ99856 593 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 MMRN2Q9H8L6 949 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 HOXC10Q9NYD6 342 aa17.76■□□□□ 0.43
AP000253.1-201ENST00000449339 TESPA1A2RU30 521 aaPredicted RBP17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 IRF6O14896 467 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 EPHB6O15197 1021 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 EDRF1Q3B7T1 1238 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 EAPPQ56P03 285 aaPredicted RBP17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 NHEJ1Q9H9Q4 299 aaPredicted RBP17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 TBCAO75347 108 aaKnown RBP17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 MARSP56192 900 aaKnown RBP17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 CDK17Q00537 523 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 ADAM9Q13443 819 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 GPR162Q16538 588 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 CCDC170Q8IYT3 715 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 A1CFQ9NQ94 594 aaKnown RBP17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 MYO1AQ9UBC5 1043 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 PLAGL2Q9UPG8 496 aa17.75■□□□□ 0.43
AP000253.1-201ENST00000449339 KIAA1217Q5T5P2 1943 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 ATP2A1O14983 1001 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 TADA3O75528 432 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 MYBP10242 640 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 CYLC1P35663 651 aaPredicted RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 KRT83P78385 493 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 C1orf186Q6ZWK4 172 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 USP50Q70EL3 339 aaPredicted RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 EPM2AIP1Q7L775 607 aaPredicted RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 ZC3H3Q8IXZ2 948 aaKnown RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 CCDC155Q8N6L0 562 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 UBXN4Q92575 508 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 ACAD9Q9H845 621 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 CYP39A1Q9NYL5 469 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 SAMM50Q9Y512 469 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 LCTP09848 1927 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 EFCAB8A8MWE9 144 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 NR3C2P08235 984 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 HNRNPH3P31942 346 aaKnown RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 HERVK_113P62684 666 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 PPP2R3AQ06190 1150 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 KNOP1Q1ED39 458 aaKnown RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 TRIM59Q8IWR1 403 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 SLC35F6Q8N357 371 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 NACC1Q96RE7 527 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 CCDC94Q9BW85 323 aaPredicted RBP17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 HAUS4Q9H6D7 363 aa17.74■□□□□ 0.43
AP000253.1-201ENST00000449339 CTAGE9A4FU28 777 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 CETN3O15182 167 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 PRPF6O94906 941 aaKnown RBP17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 NR2F2P24468 414 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 VSIG10LQ86VR7 867 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 SMCR8Q8TEV9 937 aaPredicted RBP17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 BTBD7Q9P203 1132 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 TRAF3IP3Q9Y228 551 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 DOCK5Q9H7D0 1870 aa17.73■□□□□ 0.43
AP000253.1-201ENST00000449339 EIF3CLB5ME19 914 aaKnown RBP17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 IPO7O95373 1038 aaKnown RBP17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 MUTP22033 750 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 CCND2P30279 289 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 HOXD13P35453 343 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 FBXO38Q6PIJ6 1188 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 EIF3CQ99613 913 aaKnown RBP17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 GUCA1BQ9UMX6 200 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 KCNMA1Q12791 1236 aa17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 TRMT1LQ7Z2T5 733 aaKnown RBP17.72■□□□□ 0.43
AP000253.1-201ENST00000449339 NEK11Q8NG66 645 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms