RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	PRR12	Q9ULL5	1215 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	EML1	O00423	815 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	RPS6KA5	O75582	802 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	ACTN1	P12814	892 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	CAPN2	P17655	700 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	SLC9A1	P19634	815 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	ARID5A	Q03989	594 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	KIAA0753	Q2KHM9	967 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	GLE1	Q53GS7	698 aa	Known RBP	18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	MEI1	Q5TIA1	1274 aa		18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	RBM12	Q9NTZ6	932 aa	Known RBP	18.59	■□□□□ 0.57
TOM1-210	ENST00000449058	PLSCR1	O15162	318 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	SLC16A3	O15427	465 aa	Known RBP	18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	AKAP3	O75969	853 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	UCHL3	P15374	230 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	PON1	P27169	355 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	GGCX	P38435	758 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	MATR3	P43243	847 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	CYP4A11	Q02928	519 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	C10orf76	Q5T2E6	689 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	OLFML3	Q9NRN5	406 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	RABGAP1	Q9Y3P9	1069 aa		18.58	■□□□□ 0.56
TOM1-210	ENST00000449058	NR3C1	P04150	777 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	XRCC5	P13010	732 aa	Known RBP	18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	SLC7A5	Q01650	507 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	PTK2	Q05397	1052 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	EPHA7	Q15375	998 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	MS4A14	Q96JA4	679 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	HSD17B14	Q9BPX1	270 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	PACSIN1	Q9BY11	444 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	METTL14	Q9HCE5	456 aa	Known RBP	18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	BZW2	Q9Y6E2	419 aa	Known RBP	18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	RPL13	P26373	211 aa	Known RBP	18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	EXOC3L4	Q17RC7	722 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	HINFP	Q9BQA5	517 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	RGL1	Q9NZL6	768 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	FBXL5	Q9UKA1	691 aa		18.57	■□□□□ 0.56
TOM1-210	ENST00000449058	GRID2IP	A4D2P6	1211 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	TBCA	O75347	108 aa	Known RBP	18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	FTCD	O95954	541 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	GAP43	P17677	238 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	ZNF76	P36508	570 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	PRKCI	P41743	596 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	EPHB4	P54760	987 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	RINT1	Q6NUQ1	792 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	C8orf74	Q6P047	294 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	ZNF571	Q7Z3V5	609 aa	Predicted RBP	18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	AFAP1L1	Q8TED9	768 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	RIN2	Q8WYP3	895 aa	Predicted RBP	18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	PRMT6	Q96LA8	375 aa	Predicted RBP	18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	BCAS3	Q9H6U6	928 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058		H0YIN7	160 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	SLC15A2	Q16348	729 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	EMB	Q6PCB8	327 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	LEKR1	Q6ZMV7	388 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	SLC35C1	Q96A29	364 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	INPP4A	Q96PE3	977 aa	Predicted RBP	18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	CSRNP1	Q96S65	589 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	WDR18	Q9BV38	432 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	TUFT1	Q9NNX1	390 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	SIX2	Q9NPC8	291 aa		18.56	■□□□□ 0.56
TOM1-210	ENST00000449058	PSME4	Q14997	1843 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	GOLGA6B	A6NDN3	693 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	MRPS25	P82663	173 aa	Known RBP	18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	TRAF1	Q13077	416 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	ENOX2	Q16206	610 aa	Known RBP	18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	AOC3	Q16853	763 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	MSL1	Q68DK7	614 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	CC2D2B	Q6DHV5	1058 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	OTOP1	Q7RTM1	612 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	SPICE1	Q8N0Z3	855 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	RBM46	Q8TBY0	533 aa	Known RBP	18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	CAVIN3	Q969G5	261 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	BORCS6	Q96GS4	357 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	SPAG5	Q96R06	1193 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	NENF	Q9UMX5	172 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	ATP8B3	O60423	1300 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	ZMYM2	Q9UBW7	1377 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	EIF3D	O15371	548 aa	Known RBP eCLIP	18.55	■□□□□ 0.56	3e-7	■■■□□ 15.2
TOM1-210	ENST00000449058	TGFB1I1	O43294	461 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	GCNT3	O95395	438 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	EPB41	P11171	864 aa	Known RBP	18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	ANXA13	P27216	316 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	CASP4	P49662	377 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	STAT2	P52630	851 aa		18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	HERC5	Q9UII4	1024 aa	Known RBP	18.55	■□□□□ 0.56
TOM1-210	ENST00000449058	GTPBP10	A4D1E9	387 aa	Known RBP	18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	PSMD10	O75832	226 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	SLITRK3	O94933	977 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	POLD1	P28340	1107 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	JAM2	P57087	298 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	KCNA1	Q09470	495 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	PPP2R5C	Q13362	524 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	NFIL3	Q16649	462 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	DCAF17	Q5H9S7	520 aa	Predicted RBP	18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	KIAA1755	Q5JYT7	1200 aa		18.54	■□□□□ 0.56
TOM1-210	ENST00000449058	GBP6	Q6ZN66	633 aa		18.54	■□□□□ 0.56

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