RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 TAP1Q03518 808 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 ZRSR1Q15695 479 aaKnown RBP16.38■□□□□ 0.21
CDK3-202ENST00000448471 FAM47CQ5HY64 1035 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 DTHD1Q6ZMT9 781 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 PHOSPHO2Q8TCD6 241 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 MTG1Q9BT17 334 aaPredicted RBP16.38■□□□□ 0.21
CDK3-202ENST00000448471 WDR11Q9BZH6 1224 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 DNAJC25Q9H1X3 360 aa16.38■□□□□ 0.21
CDK3-202ENST00000448471 ARIH1Q9Y4X5 557 aaPredicted RBP16.38■□□□□ 0.21
CDK3-202ENST00000448471 ACTN4O43707 911 aaKnown RBP16.37■□□□□ 0.21
CDK3-202ENST00000448471 ALDH5A1P51649 535 aaPredicted RBP16.37■□□□□ 0.21
CDK3-202ENST00000448471 NLRP12P59046 1061 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 IL17AQ16552 155 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 TMEM31Q5JXX7 168 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 HERC6Q8IVU3 1022 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 HLA-CQ95604 372 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 NAP1L4Q99733 375 aaKnown RBP16.37■□□□□ 0.21
CDK3-202ENST00000448471 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
CDK3-202ENST00000448471 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
CDK3-202ENST00000448471 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
CDK3-202ENST00000448471 LCTP09848 1927 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 NEMFO60524 1076 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 CCNT1O60563 726 aaKnown RBP16.36■□□□□ 0.21
CDK3-202ENST00000448471 ICAM1P05362 532 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 IQCF3P0C7M6 154 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 SLFN14P0C7P3 912 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 AP3B2Q13367 1082 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 NBPF20Q3BBV1 942 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 PPP4R3AQ6IN85 833 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 CEP57L1Q8IYX8 460 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 RETREG2Q8NC44 543 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 PPP1R13LQ8WUF5 828 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 AK8Q96MA6 479 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 BPIFA3Q9BQP9 254 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 SERTAD1Q9UHV2 236 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 PRRC2BQ5JSZ5 2229 aaKnown RBP16.36■□□□□ 0.21
CDK3-202ENST00000448471 SCN5AQ14524 2016 aa16.36■□□□□ 0.21
CDK3-202ENST00000448471 RBM47A0AV96 593 aaKnown RBP16.35■□□□□ 0.21
CDK3-202ENST00000448471 PITPNM1O00562 1244 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 OR52Z1P0C646 297 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 TXLNAP40222 546 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 GRB10Q13322 594 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 BAATQ14032 418 aaPredicted RBP16.35■□□□□ 0.21
CDK3-202ENST00000448471 IQCB1Q15051 598 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 POSTNQ15063 836 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 NT5DC1Q5TFE4 455 aa16.35■□□□□ 0.21
CDK3-202ENST00000448471 FOSP01100 380 aaPredicted RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 GCFC2P16383 781 aaKnown RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 BRDTQ58F21 947 aaPredicted RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 C11orf57Q6ZUT1 292 aaPredicted RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 SPRED2Q7Z698 418 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 LUZP1Q86V48 1076 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 IQUBQ8NA54 791 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 SPATA20Q8TB22 786 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 ERCC4Q92889 916 aaPredicted RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 CCSER1Q9C0I3 900 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 RANBP17Q9H2T7 1088 aaKnown RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 A0A087X0B3 334 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 NFIBO00712 420 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 EDIL3O43854 480 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 SARSP49591 514 aaKnown RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 USP11P51784 963 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 PNOCQ13519 176 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
CDK3-202ENST00000448471 E2F4Q16254 413 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 UBE2SQ16763 222 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 PDILTQ8N807 584 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDK3-202ENST00000448471 MTMR9Q96QG7 549 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 PCDHA5Q9Y5H7 936 aa16.34■□□□□ 0.21
CDK3-202ENST00000448471 TANC1Q9C0D5 1861 aa16.33■□□□□ 0.21
CDK3-202ENST00000448471 PIK3CDO00329 1044 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 MEIS2O14770 477 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 NKRFO15226 690 aaKnown RBP eCLIP16.33■□□□□ 0.23e-7■■■■□ 26.2
CDK3-202ENST00000448471 LPXNO60711 386 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 BAIAP3O94812 1187 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 KCNJ6P48051 423 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 PTPN11Q06124 597 aaPredicted RBP16.33■□□□□ 0.2
CDK3-202ENST00000448471 BFSP2Q13515 415 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 MOXD1Q6UVY6 613 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 TRIML1Q8N9V2 468 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 DHX58Q96C10 678 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 NOD1Q9Y239 953 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 REV3LO60673 3130 aa16.33■□□□□ 0.2
CDK3-202ENST00000448471 GPR37L1O60883 481 aa16.32■□□□□ 0.2
CDK3-202ENST00000448471 SMC2O95347 1197 aa16.32■□□□□ 0.2
CDK3-202ENST00000448471 DPCR1Q3MIW9 517 aa16.32■□□□□ 0.2
CDK3-202ENST00000448471 HS1BP3Q53T59 392 aa16.32■□□□□ 0.2
CDK3-202ENST00000448471 C11orf16Q9NQ32 467 aa16.32■□□□□ 0.2
CDK3-202ENST00000448471 COL4A4P53420 1690 aaPredicted RBP16.32■□□□□ 0.2
CDK3-202ENST00000448471 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms