RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 OSBPL7Q9BZF2 842 aa23.12■■□□□ 1.29
PTX4-203ENST00000447419 FTOQ9C0B1 505 aaKnown RBP eCLIP23.12■■□□□ 1.29
PTX4-203ENST00000447419 PRKCEQ02156 737 aa23.11■■□□□ 1.29
PTX4-203ENST00000447419 GPNMBQ14956 572 aa23.11■■□□□ 1.29
PTX4-203ENST00000447419 TRAF7Q6Q0C0 670 aa23.11■■□□□ 1.29
PTX4-203ENST00000447419 B3GNT9Q6UX72 402 aa23.11■■□□□ 1.29
PTX4-203ENST00000447419 DNAJB3Q8WWF6 145 aa23.11■■□□□ 1.29
PTX4-203ENST00000447419 BAG4O95429 457 aaKnown RBP23.1■■□□□ 1.29
PTX4-203ENST00000447419 U2AF2P26368 475 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTX4-203ENST00000447419 SFNP31947 248 aa23.1■■□□□ 1.29
PTX4-203ENST00000447419 TMEM62Q0P6H9 643 aa23.1■■□□□ 1.29
PTX4-203ENST00000447419 MBTPS1Q14703 1052 aa23.1■■□□□ 1.29
PTX4-203ENST00000447419 TTC38Q5R3I4 469 aa23.1■■□□□ 1.29
PTX4-203ENST00000447419 CXXC1Q9P0U4 656 aaPredicted RBP23.1■■□□□ 1.29
PTX4-203ENST00000447419 IGSF9BQ9UPX0 1349 aa23.1■■□□□ 1.29
PTX4-203ENST00000447419 NBNO60934 754 aa23.09■■□□□ 1.29
PTX4-203ENST00000447419 FGBP02675 491 aa23.09■■□□□ 1.29
PTX4-203ENST00000447419 SLC26A2P50443 739 aa23.09■■□□□ 1.29
PTX4-203ENST00000447419 FXR1P51114 621 aaKnown RBP eCLIP23.09■■□□□ 1.29
PTX4-203ENST00000447419 FAM109BQ6ICB4 259 aaPredicted RBP23.09■■□□□ 1.29
PTX4-203ENST00000447419 SPRYD3Q8NCJ5 442 aa23.09■■□□□ 1.29
PTX4-203ENST00000447419 A0A1W2PPC1 479 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 VPS37CA5D8V6 355 aaPredicted RBP23.08■■□□□ 1.29
PTX4-203ENST00000447419 RSPH10B2B2RC85 870 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 ZBTB42B2RXF5 422 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 HBP1O60381 514 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 RSPH10BP0C881 870 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 KLRC1P26715 233 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 TOB1P50616 345 aaPredicted RBP23.08■■□□□ 1.29
PTX4-203ENST00000447419 CYP4A11Q02928 519 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 PPP2R5CQ13362 524 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 TCTN1Q2MV58 587 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 PPP1R16BQ96T49 567 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 TTC12Q9H892 705 aaPredicted RBP23.08■■□□□ 1.29
PTX4-203ENST00000447419 RGL1Q9NZL6 768 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 PCDHB6Q9Y5E3 794 aa23.08■■□□□ 1.29
PTX4-203ENST00000447419 MBLAC1A4D2B0 266 aaPredicted RBP23.08■■□□□ 1.28
PTX4-203ENST00000447419 RRN3P2A6NIE6 340 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 ZBBXA8MT70 800 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 TBX3O15119 743 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 OATP04181 439 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 SPIRE1Q08AE8 756 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 PSRC1Q6PGN9 363 aaPredicted RBP23.08■■□□□ 1.28
PTX4-203ENST00000447419 MTHFD1LQ6UB35 978 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 FERMT3Q86UX7 667 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 HSCBQ8IWL3 235 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 SLFN12Q8IYM2 578 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 RPUSD2Q8IZ73 545 aaKnown RBP23.08■■□□□ 1.28
PTX4-203ENST00000447419 MTMR9Q96QG7 549 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 WRAP73Q9P2S5 460 aaPredicted RBP23.08■■□□□ 1.28
PTX4-203ENST00000447419 SEPT9Q9UHD8 586 aaPredicted RBP23.08■■□□□ 1.28
PTX4-203ENST00000447419 NOL7Q9UMY1 257 aaKnown RBP23.08■■□□□ 1.28
PTX4-203ENST00000447419 PCDHA12Q9UN75 941 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 SZT2Q5T011 3432 aa23.08■■□□□ 1.28
PTX4-203ENST00000447419 TRIP12Q14669 1992 aaPredicted RBP23.07■■□□□ 1.28
PTX4-203ENST00000447419 POTEMA6NI47 508 aa23.07■■□□□ 1.28
PTX4-203ENST00000447419 GRXCR1A8MXD5 290 aa23.07■■□□□ 1.28
PTX4-203ENST00000447419 RBL2Q08999 1139 aa23.07■■□□□ 1.28
PTX4-203ENST00000447419 BBXQ8WY36 941 aaPredicted RBP23.07■■□□□ 1.28
PTX4-203ENST00000447419 SCN5AQ14524 2016 aa23.06■■□□□ 1.28
PTX4-203ENST00000447419 CTTNQ14247 550 aaKnown RBP23.06■■□□□ 1.28
PTX4-203ENST00000447419 PLA2G4FQ68DD2 849 aa23.06■■□□□ 1.28
PTX4-203ENST00000447419 METTL13Q8N6R0 699 aa23.06■■□□□ 1.28
PTX4-203ENST00000447419 SNX21Q969T3 373 aa23.06■■□□□ 1.28
PTX4-203ENST00000447419 DYDC2Q96IM9 177 aa23.06■■□□□ 1.28
PTX4-203ENST00000447419 A0A087WWV3 80 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 CHRNA1P02708 482 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 TECP42680 631 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 MTERF2Q49AM1 385 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 TAF2Q6P1X5 1199 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 RDM1Q8NG50 284 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 TNPO1Q92973 898 aaKnown RBP23.05■■□□□ 1.28
PTX4-203ENST00000447419 GINS2Q9Y248 185 aa23.05■■□□□ 1.28
PTX4-203ENST00000447419 C22orf31O95567 290 aa23.04■■□□□ 1.28
PTX4-203ENST00000447419 OR52Z1P0C646 297 aa23.04■■□□□ 1.28
PTX4-203ENST00000447419 ZNF484Q5JVG2 852 aa23.04■■□□□ 1.28
PTX4-203ENST00000447419 LRRC71Q8N4P6 559 aa23.04■■□□□ 1.28
PTX4-203ENST00000447419 ZNF668Q96K58 619 aaPredicted RBP23.04■■□□□ 1.28
PTX4-203ENST00000447419 NRBP2Q9NSY0 501 aa23.04■■□□□ 1.28
PTX4-203ENST00000447419 PCDHA2Q9Y5H9 948 aa23.04■■□□□ 1.28
PTX4-203ENST00000447419 ZBTB39O15060 712 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 STBD1O95210 358 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 GHRP10912 638 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 RFC2P35250 354 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 CLCN3P51790 818 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 PSMC5P62195 406 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 LRIT3Q3SXY7 679 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 TMCO2Q7Z6W1 182 aaPredicted RBP23.03■■□□□ 1.28
PTX4-203ENST00000447419 TPH2Q8IWU9 490 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 HERVK_113Q902F9 699 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 FAM167AQ96KS9 214 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 LXNQ9BS40 222 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 BMP2KQ9NSY1 1161 aaPredicted RBP23.03■■□□□ 1.28
PTX4-203ENST00000447419 CDY2AQ9Y6F7 541 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 SYT1P21579 422 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 QARSP47897 775 aaKnown RBP23.03■■□□□ 1.28
PTX4-203ENST00000447419 EPHA7Q15375 998 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 RSPH3Q86UC2 560 aa23.03■■□□□ 1.28
PTX4-203ENST00000447419 ZNF579Q8NAF0 562 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms