RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 MED19A0JLT2 244 aaPredicted RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 EIF3JO75822 258 aaKnown RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 NR3C2P08235 984 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 IFNAR1P17181 557 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 NEK4P51957 841 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 LAMC2Q13753 1193 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 CAMK1Q14012 370 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 STXBP2Q15833 593 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 WWC2Q6AWC2 1192 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 HEATR3Q7Z4Q2 680 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 ADGRD2Q7Z7M1 963 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 VSIG10LQ86VR7 867 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 TEX2Q8IWB9 1127 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 APBB2Q92870 758 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 CLP1Q92989 425 aaKnown RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 EMID1Q96A84 441 aaPredicted RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 KIF2CQ99661 725 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 PLVAPQ9BX97 442 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 NCOA5Q9HCD5 579 aaKnown RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 DDX41Q9UJV9 622 aaKnown RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 BARX2Q9UMQ3 279 aaPredicted RBP14.24□□□□□ -0.13
SSR4-205ENST00000447375 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
SSR4-205ENST00000447375 CACNA1HO95180 2353 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 hCG_1984214I3L0E3 225 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 EIF2AK2P19525 551 aaKnown RBP14.23□□□□□ -0.13
SSR4-205ENST00000447375 RBM25P49756 843 aaKnown RBP14.23□□□□□ -0.13
SSR4-205ENST00000447375 AK2P54819 239 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 PFKFB3Q16875 520 aaPredicted RBP14.23□□□□□ -0.13
SSR4-205ENST00000447375 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 ZBTB33Q86T24 672 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 FCHSD1Q86WN1 690 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 ZNF713Q8N859 430 aaPredicted RBP14.23□□□□□ -0.13
SSR4-205ENST00000447375 PPTC7Q8NI37 304 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 GPKOWQ92917 476 aaPredicted RBP eCLIP14.23□□□□□ -0.13
SSR4-205ENST00000447375 CUL5Q93034 780 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 PHKBQ93100 1093 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 PDCD2LQ9BRP1 358 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 RNF26Q9BY78 433 aaPredicted RBP14.23□□□□□ -0.13
SSR4-205ENST00000447375 C22orf23Q9BZE7 217 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 TPCN1Q9ULQ1 816 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 ATG2AQ2TAZ0 1938 aa14.23□□□□□ -0.13
SSR4-205ENST00000447375 KAT6AQ92794 2004 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 FRMPD4Q14CM0 1322 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 ADGRA3Q8IWK6 1321 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 C17orf102A2RUQ5 167 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 PFKFB2O60825 505 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 CTSHP09668 335 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 SCG2P13521 617 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 ATF7P17544 494 aaPredicted RBP14.22□□□□□ -0.13
SSR4-205ENST00000447375 NRIP1P48552 1158 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 NAPAP54920 295 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 BTG3Q14201 252 aaPredicted RBP14.22□□□□□ -0.13
SSR4-205ENST00000447375 PGM5Q15124 567 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 PPP1R18Q6NYC8 613 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 DGLUCYQ7Z3D6 616 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 RBM23Q86U06 439 aaKnown RBP14.22□□□□□ -0.13
SSR4-205ENST00000447375 TMEM105Q8N8V8 129 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 RIC8AQ9NPQ8 531 aa14.22□□□□□ -0.13
SSR4-205ENST00000447375 CPLX1O14810 134 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 CAND2O75155 1236 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 GLP2RO95838 553 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 DNAJB1P25685 340 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.13
SSR4-205ENST00000447375 STK3Q13188 491 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 IL31RAQ8NI17 732 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 SMARCC2Q8TAQ2 1214 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 SPPL3Q8TCT6 385 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 P2RX5Q93086 422 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 SLKQ9H2G2 1235 aaPredicted RBP14.21□□□□□ -0.13
SSR4-205ENST00000447375 RC3H2Q9HBD1 1191 aaKnown RBP14.21□□□□□ -0.13
SSR4-205ENST00000447375 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
SSR4-205ENST00000447375 SMCO2A6NFE2 343 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 TREHO43280 583 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 ITGB1P05556 798 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 MYCLP12524 364 aaPredicted RBP14.2□□□□□ -0.14
SSR4-205ENST00000447375 HOXD8P13378 290 aaPredicted RBP14.2□□□□□ -0.14
SSR4-205ENST00000447375 CCND2P30279 289 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 SSRP1Q08945 709 aaKnown RBP14.2□□□□□ -0.14
SSR4-205ENST00000447375 SCRN1Q12765 414 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 NAALADL2Q58DX5 795 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 XRRA1Q6P2D8 792 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 CPLX2Q6PUV4 134 aaKnown RBP14.2□□□□□ -0.14
SSR4-205ENST00000447375 SUSD6Q92537 303 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 ZNF689Q96CS4 500 aaPredicted RBP14.2□□□□□ -0.14
SSR4-205ENST00000447375 RMDN1Q96DB5 314 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 SLC26A6Q9BXS9 759 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 GLT8D2Q9H1C3 349 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 TLE6Q9H808 572 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 VPS13AQ96RL7 3174 aa14.2□□□□□ -0.14
SSR4-205ENST00000447375 ESYT2A0FGR8 921 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 PPFIA3O75145 1194 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 STAM2O75886 525 aa14.19□□□□□ -0.14
SSR4-205ENST00000447375 MRPS9P82933 396 aaKnown RBP14.19□□□□□ -0.14
SSR4-205ENST00000447375 UBE2SQ16763 222 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms