RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DTWD2Q8NBA8 298 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 KREMEN2Q8NCW0 462 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 REPS2Q8NFH8 660 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 KLHDC4Q8TBB5 520 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 SH3RF3Q8TEJ3 882 aaPredicted RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 TNFRSF25Q93038 417 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 NSUN4Q96CB9 384 aaKnown RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 HSH2DQ96JZ2 352 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 CRBNQ96SW2 442 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 ABCF2Q9UG63 623 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 ANGPTL2Q9UKU9 493 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 ZNF214Q9UL59 606 aaPredicted RBP4.02□□□□□ -1.77
PMS1-215ENST00000447232 PALD1Q9ULE6 856 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 SORCS3Q9UPU3 1222 aa4.02□□□□□ -1.77
PMS1-215ENST00000447232 TAF4O00268 1085 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 ZEB2O60315 1214 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 NBNO60934 754 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 GLP2RO95838 553 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 LINC00271P0C7V0 271 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 NPR3P17342 541 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 PTGS1P23219 599 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 COPB2P35606 906 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 NDUFV1P49821 464 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 TNFAIP2Q03169 654 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 SPEM2Q0P670 501 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 BFSP2Q13515 415 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 PPM1JQ5JR12 505 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 FAM117BQ6P1L5 589 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 ARMCX2Q7L311 632 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 GLMNQ92990 594 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 CTAGE1Q96RT6 745 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 BRD7Q9NPI1 651 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 ZMIZ1Q9ULJ6 1067 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 Q9Y3F1 56 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 STARD13Q9Y3M8 1113 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 COL4A3Q01955 1670 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 GRM6O15303 877 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 FLOT1O75955 427 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 PARNO95453 639 aaKnown RBP4.01□□□□□ -1.77
PMS1-215ENST00000447232 LDHCP07864 332 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 RASA1P20936 1047 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 TGM1P22735 817 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 STAT3P40763 770 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 LMNB2Q03252 620 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 RBL2Q08999 1139 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 CAMK1Q14012 370 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 ERICH6Q7L0X2 663 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 ATG9AQ7Z3C6 839 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 CCDC146Q8IYE0 955 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 EFHBQ8N7U6 833 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 AFAP1L1Q8TED9 768 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 SUSD3Q96L08 255 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 CEP63Q96MT8 703 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 C2orf49Q9BVC5 232 aaPredicted RBP4.01□□□□□ -1.77
PMS1-215ENST00000447232 IGFLR1Q9H665 355 aa4.01□□□□□ -1.77
PMS1-215ENST00000447232 BICC1Q9H694 974 aaKnown RBP4.01□□□□□ -1.77
PMS1-215ENST00000447232 IGF2RP11717 2491 aa4□□□□□ -1.77
PMS1-215ENST00000447232 LOC400499M0QZD8 3231 aa4□□□□□ -1.77
PMS1-215ENST00000447232 DSPP15924 2871 aaKnown RBP4□□□□□ -1.77
PMS1-215ENST00000447232 F6X3S4 739 aa4□□□□□ -1.77
PMS1-215ENST00000447232 EYA2O00167 538 aa4□□□□□ -1.77
PMS1-215ENST00000447232 RB1P06400 928 aa4□□□□□ -1.77
PMS1-215ENST00000447232 NBPF7P0C2Y1 421 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 MCAMP43121 646 aa4□□□□□ -1.77
PMS1-215ENST00000447232 GSTO1P78417 241 aa4□□□□□ -1.77
PMS1-215ENST00000447232 PURAQ00577 322 aaKnown RBP4□□□□□ -1.77
PMS1-215ENST00000447232 IKBKEQ14164 716 aa4□□□□□ -1.77
PMS1-215ENST00000447232 ATP2B3Q16720 1220 aa4□□□□□ -1.77
PMS1-215ENST00000447232 ABCB5Q2M3G0 1257 aa4□□□□□ -1.77
PMS1-215ENST00000447232 NFRKBQ6P4R8 1299 aa4□□□□□ -1.77
PMS1-215ENST00000447232 ZC3H14Q6PJT7 736 aaKnown RBP4□□□□□ -1.77
PMS1-215ENST00000447232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4□□□□□ -1.77
PMS1-215ENST00000447232 RAB44Q7Z6P3 723 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 MAPKAPK5Q8IW41 473 aa4□□□□□ -1.77
PMS1-215ENST00000447232 CCDC144CPQ8IYA2 1237 aa4□□□□□ -1.77
PMS1-215ENST00000447232 ALDH16A1Q8IZ83 802 aa4□□□□□ -1.77
PMS1-215ENST00000447232 STAG2Q8N3U4 1231 aa4□□□□□ -1.77
PMS1-215ENST00000447232 CAGE1Q8TC20 777 aa4□□□□□ -1.77
PMS1-215ENST00000447232 TGFBRAP1Q8WUH2 860 aa4□□□□□ -1.77
PMS1-215ENST00000447232 RUNDC1Q96C34 613 aa4□□□□□ -1.77
PMS1-215ENST00000447232 EHD4Q9H223 541 aa4□□□□□ -1.77
PMS1-215ENST00000447232 SMOC2Q9H3U7 446 aa4□□□□□ -1.77
PMS1-215ENST00000447232 C9orf78Q9NZ63 289 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 MAFBQ9Y5Q3 323 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 ITPR1Q14643 2758 aa4□□□□□ -1.77
PMS1-215ENST00000447232 M0R082 166 aa4□□□□□ -1.77
PMS1-215ENST00000447232 VWA5AO00534 786 aa4□□□□□ -1.77
PMS1-215ENST00000447232 DYNC1LI2O43237 492 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 ALDH1L1O75891 902 aa4□□□□□ -1.77
PMS1-215ENST00000447232 MMP1P03956 469 aa4□□□□□ -1.77
PMS1-215ENST00000447232 HLA-DOAP06340 250 aa4□□□□□ -1.77
PMS1-215ENST00000447232 SPATA31C1P0DKV0 1188 aa4□□□□□ -1.77
PMS1-215ENST00000447232 SELPP16109 830 aa4□□□□□ -1.77
PMS1-215ENST00000447232 RFX5P48382 616 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 ZNF200P98182 395 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 PTPN11Q06124 597 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 TYRO3Q06418 890 aa4□□□□□ -1.77
PMS1-215ENST00000447232 CERKLQ49MI3 558 aaPredicted RBP4□□□□□ -1.77
PMS1-215ENST00000447232 ATF7IPQ6VMQ6 1270 aa4□□□□□ -1.77
PMS1-215ENST00000447232 ZNF417Q8TAU3 575 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms