RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 TMEM192Q8IY95 271 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 CCDC12Q8WUD4 166 aaPredicted RBP20.7■□□□□ 0.9
COL9A1-205ENST00000447041 TNPO1Q92973 898 aaKnown RBP20.7■□□□□ 0.9
COL9A1-205ENST00000447041 SLC26A6Q9BXS9 759 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 RC3H2Q9HBD1 1191 aaKnown RBP20.7■□□□□ 0.9
COL9A1-205ENST00000447041 NCOA5Q9HCD5 579 aaKnown RBP20.7■□□□□ 0.9
COL9A1-205ENST00000447041 PCDHA2Q9Y5H9 948 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 TRPV2Q9Y5S1 764 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 ATG2AQ2TAZ0 1938 aa20.7■□□□□ 0.9
COL9A1-205ENST00000447041 IPO5O00410 1097 aaKnown RBP20.69■□□□□ 0.9
COL9A1-205ENST00000447041 ENPP3O14638 875 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 RPLP2P05387 115 aaKnown RBP20.69■□□□□ 0.9
COL9A1-205ENST00000447041 PSMA5P28066 241 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 SLC26A2P50443 739 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 CCT2P78371 535 aaKnown RBP20.69■□□□□ 0.9
COL9A1-205ENST00000447041 IER5Q5VY09 327 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 MTHFD1LQ6UB35 978 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 IL17RAQ96F46 866 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 RNF26Q9BY78 433 aaPredicted RBP20.69■□□□□ 0.9
COL9A1-205ENST00000447041 ADGRA3Q8IWK6 1321 aa20.69■□□□□ 0.9
COL9A1-205ENST00000447041 H3BNC9 293 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 M0QZ92 97 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 LINC00271P0C7V0 271 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 GNA11P29992 359 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 PDIA3P30101 505 aaKnown RBP20.68■□□□□ 0.9
COL9A1-205ENST00000447041 SETQ01105 290 aaPredicted RBP20.68■□□□□ 0.9
COL9A1-205ENST00000447041 AKAP17AQ02040 695 aaKnown RBP20.68■□□□□ 0.9
COL9A1-205ENST00000447041 GPM6BQ13491 265 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 TOB2Q14106 344 aaPredicted RBP20.68■□□□□ 0.9
COL9A1-205ENST00000447041 FAM160B1Q5W0V3 765 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 FIBCD1Q8N539 461 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 ATP8B4Q8TF62 1192 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 MRPL38Q96DV4 380 aaKnown RBP20.68■□□□□ 0.9
COL9A1-205ENST00000447041 ZNF577Q9BSK1 485 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 UBE2ZQ9H832 354 aaPredicted RBP20.68■□□□□ 0.9
COL9A1-205ENST00000447041 ZNF302Q9NR11 478 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 VPS54Q9P1Q0 977 aa20.68■□□□□ 0.9
COL9A1-205ENST00000447041 SMIM35A0A1B0GVV1 85 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 HBP1O60381 514 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 IFNAR1P17181 557 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 ATP4AP20648 1035 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 CTNNB1P35222 781 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 EVCP57679 992 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 SWSAP1Q6NVH7 229 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 MIS18BP1Q6P0N0 1132 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 PDXDC2PQ6P474 469 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 RUFY3Q7L099 469 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 CELF4Q9BZC1 486 aaKnown RBP20.67■□□□□ 0.9
COL9A1-205ENST00000447041 IGSF9BQ9UPX0 1349 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 KIAA1671Q9BY89 1806 aa20.67■□□□□ 0.9
COL9A1-205ENST00000447041 TTC3P53804 2025 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 KLRC1P26715 233 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 PAK2Q13177 524 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 PTPROQ16827 1216 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 PRR16Q569H4 304 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 MCTP2Q6DN12 878 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 RTN4RL1Q86UN2 441 aaPredicted RBP20.66■□□□□ 0.9
COL9A1-205ENST00000447041 CCDC148Q8NFR7 591 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 ZNF689Q96CS4 500 aaPredicted RBP20.66■□□□□ 0.9
COL9A1-205ENST00000447041 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 PADI3Q9ULW8 664 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 SQORQ9Y6N5 450 aa20.66■□□□□ 0.9
COL9A1-205ENST00000447041 COL1A2P08123 1366 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 KDM3AQ9Y4C1 1321 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-205ENST00000447041 ZBTB42B2RXF5 422 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 KRT76Q01546 638 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 TMEM266Q2M3C6 531 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 TIGD5Q53EQ6 642 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 ZNF746Q6NUN9 644 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-205ENST00000447041 BICD2Q8TD16 824 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 LENG9Q96B70 501 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 TBC1D22BQ9NU19 505 aa20.65■□□□□ 0.9
COL9A1-205ENST00000447041 EDIL3O43854 480 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 DGKIO75912 1065 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 CIITAP33076 1130 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 BTG3Q14201 252 aaPredicted RBP20.64■□□□□ 0.89
COL9A1-205ENST00000447041 TRMT1LQ7Z2T5 733 aaKnown RBP20.64■□□□□ 0.89
COL9A1-205ENST00000447041 CKAP2LQ8IYA6 745 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 NME8Q8N427 588 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 BANK1Q8NDB2 785 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
COL9A1-205ENST00000447041 FTHL17Q9BXU8 183 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 TMX1Q9H3N1 280 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 GINS2Q9Y248 185 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 WDR81Q562E7 1941 aa20.64■□□□□ 0.89
COL9A1-205ENST00000447041 MYH9P35579 1960 aaKnown RBP20.63■□□□□ 0.89
COL9A1-205ENST00000447041 C5orf67F2Z3F1 127 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 EPB41L2O43491 1005 aaKnown RBP20.63■□□□□ 0.89
COL9A1-205ENST00000447041 C22orf31O95567 290 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 KCNA5P22460 613 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 TCEAL5Q5H9L2 206 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 ZNF484Q5JVG2 852 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 SMAP1Q8IYB5 467 aaPredicted RBP20.63■□□□□ 0.89
COL9A1-205ENST00000447041 KIAA0319LQ8IZA0 1049 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 CRIPAKQ8N1N5 446 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 TMEM40Q8WWA1 233 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 CLP1Q92989 425 aaKnown RBP20.63■□□□□ 0.89
COL9A1-205ENST00000447041 PPP1R16BQ96T49 567 aa20.63■□□□□ 0.89
COL9A1-205ENST00000447041 UPF3BQ9BZI7 483 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms