RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 SUPT20HL1Q3ZLR7 823 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 SPON1Q9HCB6 807 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 PDXKO00764 312 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 URI1O94763 535 aaPredicted RBP19.26■□□□□ 0.67
SMC6-206ENST00000446852 COG2Q14746 738 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 CATSPERGQ6ZRH7 1159 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 MYCT1Q8N699 235 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 NEK9Q8TD19 979 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 IQCDQ96DY2 449 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 FIZ1Q96SL8 496 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.26■□□□□ 0.67
SMC6-206ENST00000446852 V9GYY5 206 aaPredicted RBP19.26■□□□□ 0.67
SMC6-206ENST00000446852 ZMYM2Q9UBW7 1377 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 CETN3O15182 167 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 NMT1P30419 496 aaKnown RBP19.25■□□□□ 0.67
SMC6-206ENST00000446852 ZNF131P52739 623 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 ARHGEF16Q5VV41 709 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 ERO1AQ96HE7 468 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 PARVGQ9HBI0 331 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 ATP9AO75110 1047 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 OAZ1P54368 228 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 ARHGAP29Q52LW3 1261 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.25■□□□□ 0.67
SMC6-206ENST00000446852 ZNF397Q8NF99 534 aaPredicted RBP19.25■□□□□ 0.67
SMC6-206ENST00000446852 IKZF4Q9H2S9 585 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 TYW1Q9NV66 732 aaKnown RBP19.25■□□□□ 0.67
SMC6-206ENST00000446852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMC6-206ENST00000446852 SNCAIPQ9Y6H5 919 aa19.25■□□□□ 0.67
SMC6-206ENST00000446852 P4HBP07237 508 aaKnown RBP19.24■□□□□ 0.67
SMC6-206ENST00000446852 ZC2HC1CQ53FD0 456 aaPredicted RBP19.24■□□□□ 0.67
SMC6-206ENST00000446852 ZNHIT6Q9NWK9 470 aaKnown RBP19.24■□□□□ 0.67
SMC6-206ENST00000446852 TMOD4Q9NZQ9 345 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 KCND2Q9NZV8 630 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 HNRNPH3P31942 346 aaKnown RBP19.24■□□□□ 0.67
SMC6-206ENST00000446852 HERVK_113P62684 666 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 VGLL4Q14135 290 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 BAP1Q92560 729 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 NHEJ1Q9H9Q4 299 aaPredicted RBP19.24■□□□□ 0.67
SMC6-206ENST00000446852 TBC1D22BQ9NU19 505 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 ODF2LQ9ULJ1 636 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 PLAGL2Q9UPG8 496 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 SAMM50Q9Y512 469 aa19.24■□□□□ 0.67
SMC6-206ENST00000446852 TESPA1A2RU30 521 aaPredicted RBP19.23■□□□□ 0.67
SMC6-206ENST00000446852 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 SPDYE16A6NNV3 312 aaPredicted RBP19.23■□□□□ 0.67
SMC6-206ENST00000446852 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMC6-206ENST00000446852 TGFB1I1O43294 461 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 CALUO43852 315 aaPredicted RBP19.23■□□□□ 0.67
SMC6-206ENST00000446852 KIF5CO60282 957 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 CDK17Q00537 523 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 MAPK7Q13164 816 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 DAW1Q8N136 415 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 ZSWIM4Q9H7M6 989 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 ADM5C9JUS6 153 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 NR3C1P04150 777 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 GUCY2CP25092 1073 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 ADARB2Q9NS39 739 aaKnown RBP19.23■□□□□ 0.67
SMC6-206ENST00000446852 RNF181Q9P0P0 153 aa19.23■□□□□ 0.67
SMC6-206ENST00000446852 A0A0G2JMZ2 1700 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 LRRC53A6NM62 1247 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 ATP2A1O14983 1001 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 AKAP3O75969 853 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 NOL4O94818 638 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 PLEKP08567 350 aaPredicted RBP19.22■□□□□ 0.67
SMC6-206ENST00000446852 UGCGQ16739 394 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 KSR1Q8IVT5 923 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 NEK11Q8NG66 645 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 TEX13BQ9BXU2 312 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 SEL1LQ9UBV2 794 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 TRIM10Q9UDY6 481 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 FAM184BQ9ULE4 1060 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 TFR2Q9UP52 801 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 CLIC2O15247 247 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 HIP1RO75146 1068 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 CCNE2O96020 404 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 MAP3K9P80192 1104 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 SH3D19Q5HYK7 790 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 ZNF569Q5MCW4 686 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 PADI6Q6TGC4 694 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 ZNF720Q7Z2F6 126 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 CRACR2AQ9BSW2 395 aa19.22■□□□□ 0.67
SMC6-206ENST00000446852 NR3C2P08235 984 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 QARSP47897 775 aaKnown RBP19.21■□□□□ 0.67
SMC6-206ENST00000446852 CASP4P49662 377 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 APBA1Q02410 837 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 KCNH2Q12809 1159 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 ODR4Q5SWX8 454 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 RRAGAQ7L523 313 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 FRMD5Q7Z6J6 570 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 FAM178BQ8IXR5 827 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 CCDC170Q8IYT3 715 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 ARHGAP20Q9P2F6 1191 aa19.21■□□□□ 0.67
SMC6-206ENST00000446852 ARMCX3Q9UH62 379 aaPredicted RBP19.21■□□□□ 0.67
SMC6-206ENST00000446852 CCND2P30279 289 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 CYLC1P35663 651 aaPredicted RBP19.2■□□□□ 0.66
SMC6-206ENST00000446852 GPIHBP1Q8IV16 184 aa19.2■□□□□ 0.66
SMC6-206ENST00000446852 A1CFQ9NQ94 594 aaKnown RBP19.2■□□□□ 0.66
SMC6-206ENST00000446852 CYP39A1Q9NYL5 469 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms