RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 SMIM24O75264 130 aa13.08□□□□□ -0.31
APLF-203ENST00000445692 TRIM49P0CI25 452 aa13.08□□□□□ -0.31
APLF-203ENST00000445692 TRIM49CP0CI26 452 aa13.08□□□□□ -0.31
APLF-203ENST00000445692 GLE1Q53GS7 698 aaKnown RBP13.08□□□□□ -0.31
APLF-203ENST00000445692 EAPPQ56P03 285 aaPredicted RBP13.08□□□□□ -0.31
APLF-203ENST00000445692 TMED8Q6PL24 325 aaPredicted RBP13.08□□□□□ -0.31
APLF-203ENST00000445692 SRRM1Q8IYB3 904 aaKnown RBP13.08□□□□□ -0.31
APLF-203ENST00000445692 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.31
APLF-203ENST00000445692 BHMT2Q9H2M3 363 aa13.08□□□□□ -0.31
APLF-203ENST00000445692 PLCB1Q9NQ66 1216 aa13.08□□□□□ -0.31
APLF-203ENST00000445692 CEP72Q9P209 647 aa13.08□□□□□ -0.31
APLF-203ENST00000445692 AARSP49588 968 aaKnown RBP eCLIP13.08□□□□□ -0.32
APLF-203ENST00000445692 GTF2IP78347 998 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 TMED2Q15363 201 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 KLHDC7AQ5VTJ3 777 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 HHATQ5VTY9 493 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 ZNF804AQ7Z570 1209 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 SFR1Q86XK3 245 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 RNF10Q8N5U6 811 aaKnown RBP13.08□□□□□ -0.32
APLF-203ENST00000445692 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 RNF14Q9UBS8 474 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 PCDHA1Q9Y5I3 950 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 EVI5O60447 810 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 PTK2Q05397 1052 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 KCNB1Q14721 858 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 SEC23AQ15436 765 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 CUEDC2Q9H467 287 aa13.08□□□□□ -0.32
APLF-203ENST00000445692 ZNF263O14978 683 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 HSPA1LP34931 641 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 POLE2P56282 527 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 LRRC63Q05C16 580 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 SUPT20HQ8NEM7 779 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 NSMCE1Q8WV22 266 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 MCUR1Q96AQ8 359 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 RIC8AQ9NPQ8 531 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 IKBKGQ9Y6K9 419 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 TRIM37O94972 964 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 PBX1P40424 430 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 SH3RF1Q7Z6J0 888 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 METTL13Q8N6R0 699 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
APLF-203ENST00000445692 TCRBV5S4A2TA0A5A2 114 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 TCP11X1B4DZS4 312 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 ALDH3A1P30838 453 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
APLF-203ENST00000445692 CUL1Q13616 776 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 CDC37Q16543 378 aaPredicted RBP13.07□□□□□ -0.32
APLF-203ENST00000445692 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 LONRF1Q17RB8 773 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 SLC30A10Q6XR72 485 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 STXBP4Q6ZWJ1 553 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 FAM186BQ8IYM0 893 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 USP38Q8NB14 1042 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 PPP1R14CQ8TAE6 165 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 CEP95Q96GE4 821 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 PBKQ96KB5 322 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 FAM84BQ96KN1 310 aaPredicted RBP13.07□□□□□ -0.32
APLF-203ENST00000445692 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
APLF-203ENST00000445692 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 CAND2O75155 1236 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 BAG2O95816 211 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 PMS2P54278 862 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 TNIP1Q15025 636 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 PIK3R5Q8WYR1 880 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 STMN2Q93045 179 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.07□□□□□ -0.32
APLF-203ENST00000445692 NT5C3AQ9H0P0 336 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 FGFR1OP2Q9NVK5 253 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 BARHL2Q9NY43 387 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
APLF-203ENST00000445692 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 UPP2O95045 317 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 GNA14O95837 355 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
APLF-203ENST00000445692 APTXQ7Z2E3 356 aaKnown RBP13.06□□□□□ -0.32
APLF-203ENST00000445692 KIAA0895Q8NCT3 520 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 STAMBPL1Q96FJ0 436 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 SGSM3Q96HU1 749 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 CCSER1Q9C0I3 900 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 IQCGQ9H095 443 aaKnown RBP13.06□□□□□ -0.32
APLF-203ENST00000445692 ECT2Q9H8V3 914 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 SALL4Q9UJQ4 1053 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 OVOS2A0A0G2JMS6 1433 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 KDM6AO15550 1401 aaPredicted RBP13.06□□□□□ -0.32
APLF-203ENST00000445692 LOC102724428A0A0B4J2F2 783 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 GOLGA8IPA6NC78 632 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 GOLGA8JA6NMD2 632 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 GBP1P32455 592 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 SCTRP47872 440 aa13.06□□□□□ -0.32
APLF-203ENST00000445692 CDK8P49336 464 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms