RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 ATG4CQ96DT6 458 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 HAUS4Q9H6D7 363 aa18.51■□□□□ 0.55
LAPTM4B-201ENST00000445593 KRT86O43790 486 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 MOCS3O95396 460 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 TEKT3Q9BXF9 490 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 PARD6BQ9BYG5 372 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 TBC1D12O60347 775 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 ICAM1P05362 532 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 HMGCS2P54868 508 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 RPS6P62753 249 aaKnown RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 MRPS25P82663 173 aaKnown RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 GJB7Q6PEY0 223 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 TMCO3Q6UWJ1 677 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 ARMCX3Q9UH62 379 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 MYO6Q9UM54 1294 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 PLAGL2Q9UPG8 496 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 H2AFXP16104 143 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 PTGER2P43116 358 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 IRX5P78411 483 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 TNFAIP1Q13829 316 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 ODR4Q5SWX8 454 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 FKBP1CQ5VVH2 108 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 MCTP2Q6DN12 878 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 SRGAP1Q7Z6B7 1085 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 NOA1Q8NC60 698 aaKnown RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 BAP1Q92560 729 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 ZBED3Q96IU2 234 aaPredicted RBP18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 RIPK3Q9Y572 518 aa18.5■□□□□ 0.55
LAPTM4B-201ENST00000445593 NR3C1P04150 777 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 CXCR5P32302 372 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 MIER3Q7Z3K6 550 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 TRIM59Q8IWR1 403 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 SLC5A5Q92911 643 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 EHMT1Q9H9B1 1298 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 CAPN6Q9Y6Q1 641 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 PITPNM2Q9BZ72 1349 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 TISP43B9A030 160 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 NOL4O94818 638 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 KIF20AO95235 890 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 MYCNP04198 464 aaPredicted RBP18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 TGFB2P61812 414 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 POLR3CQ9BUI4 534 aaPredicted RBP18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 ZHX2Q9Y6X8 837 aa18.49■□□□□ 0.55
LAPTM4B-201ENST00000445593 ARHGEF35A5YM69 484 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 USO1O60763 962 aaKnown RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 PDXDC1Q6P996 788 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 TEX2Q8IWB9 1127 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 FAM178BQ8IXR5 827 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 MTMR14Q8NCE2 650 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 MXRA8Q9BRK3 442 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 ARGLU1Q9NWB6 273 aaPredicted RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 TCEAL9Q9UHQ7 104 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 DDX41Q9UJV9 622 aaKnown RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 PCDHA13Q9Y5I0 950 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 COL2A1P02458 1487 aaPredicted RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 FRMD3A2A2Y4 597 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 TRPM4Q8TD43 1214 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 CLEC4DQ8WXI8 215 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 CCDC43Q96MW1 224 aaKnown RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 KCNG1Q9UIX4 513 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 ASTN1O14525 1302 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 ERICH4A6NGS2 130 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 EIF3CLB5ME19 914 aaKnown RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 TRAF1Q13077 416 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 EIF3CQ99613 913 aaKnown RBP18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 PARVGQ9HBI0 331 aa18.48■□□□□ 0.55
LAPTM4B-201ENST00000445593 NCK2O43639 380 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 TLR2O60603 784 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 XRCC5P13010 732 aaKnown RBP18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 MAGEA1P43355 309 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 ITGB3BPQ13352 177 aaPredicted RBP18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 CEP63Q96MT8 703 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 PCIF1Q9H4Z3 704 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 CTAGE15A4D2H0 777 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 ATP9AO75110 1047 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 ZMYND10O75800 440 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 CTAGE8P0CG41 777 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 MATR3P43243 847 aaKnown RBP eCLIP18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 MRPS9P82933 396 aaKnown RBP18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 MTMR1Q13613 665 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 SFMBT2Q5VUG0 894 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 C1orf186Q6ZWK4 172 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 RSRC2Q7L4I2 434 aaKnown RBP18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 CTAGE6Q86UF2 777 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 CTAGE4Q8IX94 777 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 SYTL5Q8TDW5 730 aaPredicted RBP18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 SPAG5Q96R06 1193 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 RMDN3Q96TC7 470 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 ADAMTS1Q9UHI8 967 aa18.47■□□□□ 0.55
LAPTM4B-201ENST00000445593 A0A1W2PQJ5 194 aa18.46■□□□□ 0.55
LAPTM4B-201ENST00000445593 WDR46O15213 610 aaKnown RBP18.46■□□□□ 0.55
LAPTM4B-201ENST00000445593 TRIM49P0CI25 452 aa18.46■□□□□ 0.55
LAPTM4B-201ENST00000445593 TRIM49CP0CI26 452 aa18.46■□□□□ 0.55
LAPTM4B-201ENST00000445593 VAV2P52735 878 aa18.46■□□□□ 0.55
LAPTM4B-201ENST00000445593 SYCP3Q8IZU3 236 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms