RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 CDX4O14627 284 aaPredicted RBP7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 ZBED4O75132 1171 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 UPP2O95045 317 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 CASTP20810 708 aaKnown RBP7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 SLC14A1Q13336 389 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 RABL6Q3YEC7 729 aaPredicted RBP7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 TAF1BQ53T94 588 aaPredicted RBP7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 KIAA1211LQ6NV74 962 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 TTC6Q86TZ1 520 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 FMNL3Q8IVF7 1028 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 FAM26EQ8N5C1 309 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 SPATA20Q8TB22 786 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 ZNF768Q9H5H4 540 aaKnown RBP7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 CHMP3Q9Y3E7 222 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 FLT1P17948 1338 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 DNAH14Q0VDD8 3507 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 CEP295Q9C0D2 2601 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 C2orf71A6NGG8 1288 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 SFTPCP11686 197 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 HOXD12P35452 270 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 PSEN2P49810 448 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 C7orf31Q8N865 590 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 SCFD2Q8WU76 684 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 DNAAF4Q8WXU2 420 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 ACAD9Q9H845 621 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 ADD3Q9UEY8 706 aaKnown RBP7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 DNAH12Q6ZR08 3092 aa7.77□□□□□ -1.17
BRAFP1-201ENST00000445336 AXIN1O15169 862 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 C8BP07358 591 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 ZNF853P0CG23 659 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 SP100P23497 879 aaPredicted RBP7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 SIM1P81133 766 aaPredicted RBP7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 KRT17Q04695 432 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 LRRC47Q8N1G4 583 aaKnown RBP7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 CHCHD4Q8N4Q1 142 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 BBXQ8WY36 941 aaPredicted RBP7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 TTC9Q92623 222 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 WDR11Q9BZH6 1224 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 PNMA2Q9UL42 364 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 ALDH1L1O75891 902 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 F2P00734 622 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 ZYXQ15942 572 aaKnown RBP7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 LPAL2Q16609 132 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 DGKKQ5KSL6 1271 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 TCF25Q9BQ70 676 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 SLF1Q9BQI6 1058 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 ENTPD7Q9NQZ7 604 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 SERPINB13Q9UIV8 391 aa7.76□□□□□ -1.17
BRAFP1-201ENST00000445336 MYH8P13535 1937 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 CHURC1-FNTBB4DL54 471 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 FNTBP49356 437 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 CC2D1BQ5T0F9 858 aaKnown RBP7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 KIAA1211Q6ZU35 1233 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 KAT2BQ92831 832 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 FAM117AQ9C073 453 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 GOPCQ9HD26 462 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 IFT57Q9NWB7 429 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 GREB1LQ9C091 1923 aaPredicted RBP7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 LAMP2P13473 410 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 PTGDRQ13258 359 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 PPP2R5BQ15173 497 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 CABP7Q86V35 215 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 MYO16Q9Y6X6 1858 aa7.75□□□□□ -1.17
BRAFP1-201ENST00000445336 CCDC194A0A1B0GVG4 234 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 LRRN2O75325 713 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 CAVIN2O95810 425 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 MECOMQ03112 1051 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 ELF2Q15723 593 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 TSSK4Q6SA08 328 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 RABEPKQ7Z6M1 372 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 SEMA3CQ99985 751 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 GPRC5CQ9NQ84 441 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 DOCK8Q8NF50 2099 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 RBM10P98175 930 aaKnown RBP7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 KRT24Q2M2I5 525 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 PLPP4Q5VZY2 271 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 LLGL2Q6P1M3 1020 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 RPAP2Q8IXW5 612 aaPredicted RBP7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 CACTIN-AS1Q8N1I8 211 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 PRPF38AQ8NAV1 312 aaKnown RBP7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 NXPE2Q96DL1 559 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 C1orf112Q9NSG2 853 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 SWAP70Q9UH65 585 aa7.74□□□□□ -1.17
BRAFP1-201ENST00000445336 GRM8O00222 908 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 HOXA2O43364 376 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 RPP40O75818 363 aaKnown RBP7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 CIAO1O76071 339 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 GNAT1P11488 350 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 PPP2R1AP30153 589 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 TOGARAM2Q6ZUX3 1019 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 NSUN4Q96CB9 384 aaKnown RBP7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 CCDC17Q96LX7 622 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 ELAC1Q9H777 363 aaKnown RBP7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 DKK3Q9UBP4 350 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 MYO7AQ13402 2215 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 LNP1A1A4G5 178 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 GNAI1P63096 354 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 RAB3GAP1Q15042 981 aa7.73□□□□□ -1.17
BRAFP1-201ENST00000445336 DGKDQ16760 1214 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms