RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 TIPINQ9BVW5 301 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 SAMM50Q9Y512 469 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 RIPK3Q9Y572 518 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 SPDYE16A6NNV3 312 aaPredicted RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 WDR64B1ANS9 1081 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 NR2F2P24468 414 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 CDK17Q00537 523 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 ITGB3BPQ13352 177 aaPredicted RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 NFIL3Q16649 462 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 TRIM65Q6PJ69 517 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 FRMD5Q7Z6J6 570 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 VSIG10LQ86VR7 867 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 BANK1Q8NDB2 785 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 SIK3Q9Y2K2 1263 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
SNX13-204ENST00000444712 RSPH10B2B2RC85 870 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 SLC16A3O15427 465 aaKnown RBP17.29■□□□□ 0.36
SNX13-204ENST00000444712 CTIFO43310 598 aaKnown RBP17.29■□□□□ 0.36
SNX13-204ENST00000444712 DKC1O60832 514 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNX13-204ENST00000444712 NR3C2P08235 984 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 RSPH10BP0C881 870 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 ERVK-24P63145 666 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 ALCAMQ13740 583 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 PRKG1Q13976 671 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 MTF1Q14872 753 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 TRIM59Q8IWR1 403 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 PROCA1Q8NCQ7 364 aaPredicted RBP17.29■□□□□ 0.36
SNX13-204ENST00000444712 DESI2Q9BSY9 194 aa17.29■□□□□ 0.36
SNX13-204ENST00000444712 METTL14Q9HCE5 456 aaKnown RBP17.29■□□□□ 0.36
SNX13-204ENST00000444712 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.29■□□□□ 0.36
SNX13-204ENST00000444712 TESPA1A2RU30 521 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 RNF225M0QZC1 329 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 MYBP10242 640 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 CYLC1P35663 651 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 CASP5P51878 434 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 ZNF746Q6NUN9 644 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 C4orf19Q8IY42 314 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 CCDC170Q8IYT3 715 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 L3MBTL3Q96JM7 780 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 CCDC43Q96MW1 224 aaKnown RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 SENP7Q9BQF6 1050 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 NUCKS1Q9H1E3 243 aaKnown RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 PKD2L1Q9P0L9 805 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 FBXO40Q9UH90 709 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 DNAI1Q9UI46 699 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 PCDHB13Q9Y5F0 798 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 SCN4AP35499 1836 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 ZC3H4Q9UPT8 1303 aaKnown RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 PPATQ06203 517 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 NEK11Q8NG66 645 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 INPP4AQ96PE3 977 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 CYP39A1Q9NYL5 469 aa17.28■□□□□ 0.36
SNX13-204ENST00000444712 WRAP73Q9P2S5 460 aaPredicted RBP17.28■□□□□ 0.36
SNX13-204ENST00000444712 LCTP09848 1927 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 PRPF6O94906 941 aaKnown RBP17.27■□□□□ 0.36
SNX13-204ENST00000444712 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.36
SNX13-204ENST00000444712 PSMC5P62195 406 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 KRT83P78385 493 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 SMAP1Q8IYB5 467 aaPredicted RBP17.27■□□□□ 0.36
SNX13-204ENST00000444712 ANKRD13AQ8IZ07 590 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 DNERQ8NFT8 737 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 GOLGA5Q8TBA6 731 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 IWS1Q96ST2 819 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 MMRN2Q9H8L6 949 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 L2HGDHQ9H9P8 463 aa17.27■□□□□ 0.36
SNX13-204ENST00000444712 EPN1Q9Y6I3 576 aaPredicted RBP17.27■□□□□ 0.36
SNX13-204ENST00000444712 PFASO15067 1338 aa17.27■□□□□ 0.35
SNX13-204ENST00000444712 NFASCO94856 1347 aa17.27■□□□□ 0.35
SNX13-204ENST00000444712 ADM5C9JUS6 153 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 KIF5CO60282 957 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 NDUFA10O95299 355 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 EPB41P11171 864 aaKnown RBP17.26■□□□□ 0.35
SNX13-204ENST00000444712 CASQ1P31415 396 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 HNRNPH3P31942 346 aaKnown RBP17.26■□□□□ 0.35
SNX13-204ENST00000444712 GNG11P61952 73 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 PLS1Q14651 629 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 ERO1BQ86YB8 467 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 SLC17A8Q8NDX2 589 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 A1CFQ9NQ94 594 aaKnown RBP17.26■□□□□ 0.35
SNX13-204ENST00000444712 ANKEF1Q9NU02 776 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 LARSQ9P2J5 1176 aaKnown RBP17.26■□□□□ 0.35
SNX13-204ENST00000444712 MYO1AQ9UBC5 1043 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 ARMCX3Q9UH62 379 aaPredicted RBP17.26■□□□□ 0.35
SNX13-204ENST00000444712 RASSF10A6NK89 507 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 CXCL11O14625 94 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 NR3C1P04150 777 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 ODR4Q5SWX8 454 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 HS2ST1Q7LGA3 356 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 AGPAT5Q9NUQ2 364 aa17.26■□□□□ 0.35
SNX13-204ENST00000444712 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms