RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SH3GL2Q99962 352 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
LIN54-202ENST00000442461 KCNG1Q9UIX4 513 aa11.08□□□□□ -0.64
LIN54-202ENST00000442461 TMEM120BA0PK00 339 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 RSPH10B2B2RC85 870 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 GYPCP04921 128 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 RSPH10BP0C881 870 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 CALB2P22676 271 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 MAP4P27816 1152 aaKnown RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 CHRNA3P32297 505 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 RAP1GDS1P52306 607 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
LIN54-202ENST00000442461 DHX34Q14147 1143 aaKnown RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 PLS1Q14651 629 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ADRM1Q16186 407 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 GJC2Q5T442 439 aaPredicted RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 FNBP1Q96RU3 617 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 CCT7Q99832 543 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 KLHL25Q9H0H3 589 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 SENP1Q9P0U3 644 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 COL4A3BPQ9Y5P4 624 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ABLIM1O14639 778 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 RAD51CO43502 376 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 FMNL1O95466 1100 aaPredicted RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 ALDH5A1P51649 535 aaPredicted RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 PPP2R5CQ13362 524 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 NDNQ99608 321 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 TMCO1Q9UM00 188 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ASAP2O43150 1006 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 IFNAR1P17181 557 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 PPIDQ08752 370 aaKnown RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 LLGL1Q15334 1064 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 SNX30Q5VWJ9 437 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 GPR101Q96P66 508 aaPredicted RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 RPS6KC1Q96S38 1066 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 GJB4Q9NTQ9 266 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ABCC12Q96J65 1359 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ZNF518AQ6AHZ1 1483 aa11.07□□□□□ -0.64
LIN54-202ENST00000442461 ATXN2Q99700 1313 aaKnown RBP11.07□□□□□ -0.64
LIN54-202ENST00000442461 IQANK1A0A1B0GTG1 560 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 TOM1L1O75674 476 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 GCNT3O95395 438 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 CLPTM1O96005 669 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 OR52Z1P0C646 297 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 SERPINB1P30740 379 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 THOC5Q13769 683 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 FAM186BQ8IYM0 893 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 STK32AQ8WU08 396 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 KAT2BQ92831 832 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 DKK3Q9UBP4 350 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 NESP48681 1621 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 FOXN1O15353 648 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 CDH16O75309 829 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 TARSP26639 723 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 INPP1P49441 399 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 BASP1P80723 227 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 TRIP13Q15645 432 aaPredicted RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 WASHC2DQ5SRD0 308 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 RNF26Q9BY78 433 aaPredicted RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 FAM96AQ9H5X1 160 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 SMARCAL1Q9NZC9 954 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 CRCPO75575 148 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 CASP1P29466 404 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 EIF2B2P49770 351 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 GRIN1Q05586 938 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 TEDDM1Q5T9Z0 273 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 PATL1Q86TB9 770 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 CCDC134Q9H6E4 229 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 ARMT1Q9H993 441 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 DNM3Q9UQ16 869 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 ACTN1P12814 892 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 PMS1P54277 932 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 FSCBQ5H9T9 825 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 TRMT10CQ7L0Y3 403 aaKnown RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 THTPAQ9BU02 230 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 KIFC3Q9BVG8 833 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 ROPN1BQ9BZX4 212 aaPredicted RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 ROPN1Q9HAT0 212 aaPredicted RBP11.06□□□□□ -0.64
LIN54-202ENST00000442461 CEP72Q9P209 647 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 ANKFY1Q9P2R3 1169 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 COMMD3-BMI1R4GMX3 469 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 REREQ9P2R6 1566 aa11.06□□□□□ -0.64
LIN54-202ENST00000442461 TTI1O43156 1089 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 PRDM1O75626 825 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 FESP07332 822 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 PYGBP11216 843 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 KRT3P12035 628 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 KRT4P19013 534 aa11.05□□□□□ -0.64
LIN54-202ENST00000442461 PRCPP42785 496 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms