RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 PAK2Q13177 524 aa23.41■■□□□ 1.34
TMEM50B-204ENST00000442441 UBE2SQ16763 222 aa23.41■■□□□ 1.34
TMEM50B-204ENST00000442441 TRIM67Q6ZTA4 783 aa23.41■■□□□ 1.34
TMEM50B-204ENST00000442441 CMTR1Q8N1G2 835 aaKnown RBP23.41■■□□□ 1.34
TMEM50B-204ENST00000442441 TRPC6Q9Y210 931 aa23.41■■□□□ 1.34
TMEM50B-204ENST00000442441 TMEM221A6NGB7 291 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 LOC730098B7Z3J9 87 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 M0R296 226 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 CASC1Q6TDU7 716 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 RBM23Q86U06 439 aaKnown RBP23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 PBXIP1Q96AQ6 731 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 MTA3Q9BTC8 594 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 CELF4Q9BZC1 486 aaKnown RBP23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 SLC9A2Q9UBY0 812 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 PCDHA6Q9UN73 950 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 PCDHA8Q9Y5H6 950 aa23.4■■□□□ 1.34
TMEM50B-204ENST00000442441 SGSM2O43147 1006 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 GLP2RO95838 553 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 NFXL1Q6ZNB6 911 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 TRAPPC12Q8WVT3 735 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 MAP4K1Q92918 833 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 LRFN2Q9ULH4 789 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 BARX2Q9UMQ3 279 aaPredicted RBP23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 LOXHD1Q8IVV2 1947 aa23.39■■□□□ 1.33
TMEM50B-204ENST00000442441 KDM3AQ9Y4C1 1321 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 PRC1O43663 620 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 GATMP50440 423 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 CBX2Q14781 532 aaPredicted RBP23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 PLCB4Q15147 1175 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 PKN1Q16512 942 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 PLPPR4Q7Z2D5 763 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 TMTC2Q8N394 836 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 NME8Q8N427 588 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 PRSS33Q8NF86 280 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 TMX1Q9H3N1 280 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 KCNH7Q9NS40 1196 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 USP15Q9Y4E8 981 aaPredicted RBP23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 PCDHGC5Q9Y5F6 944 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 ZDBF2Q9HCK1 2354 aa23.38■■□□□ 1.33
TMEM50B-204ENST00000442441 SMIM35A0A1B0GVV1 85 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 hCG_1642624A0A1W2PR95 340 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 CCDC69A6NI79 296 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 PPFIA3O75145 1194 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 STAT5BP51692 787 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 ZXDAP98168 799 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 KRT76Q01546 638 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 PHOX2BQ99453 314 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 TLE6Q9H808 572 aa23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 RBM8AQ9Y5S9 174 aaKnown RBP23.37■■□□□ 1.33
TMEM50B-204ENST00000442441 SH2B2O14492 632 aaPredicted RBP23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 CALM1P0DP23 149 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 CALM2P0DP24 149 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 CALM3P0DP25 149 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 RXRAP19793 462 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 SARSP49591 514 aaKnown RBP23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 PTPN5P54829 565 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 ACTR2P61160 394 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 UBE3AQ05086 875 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 IER5LQ5T953 404 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 FAM43BQ6ZT52 329 aaPredicted RBP23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 MICAL1Q8TDZ2 1067 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 PRRX2Q99811 253 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 MXRA8Q9BRK3 442 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 SDF4Q9BRK5 362 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 PHF7Q9BWX1 381 aaPredicted RBP23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 PCDHB12Q9Y5F1 795 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 PLXNA4Q9HCM2 1894 aa23.36■■□□□ 1.33
TMEM50B-204ENST00000442441 NFASCO94856 1347 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 IBSPP21815 317 aaPredicted RBP23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 MCM5P33992 734 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 NFX1Q12986 1120 aaKnown RBP23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 TMEM266Q2M3C6 531 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 MTHFD1LQ6UB35 978 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 SUGP1Q8IWZ8 645 aaKnown RBP23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 CYP2W1Q8TAV3 490 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 TMEM87BQ96K49 555 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 PCDHB7Q9Y5E2 793 aa23.35■■□□□ 1.33
TMEM50B-204ENST00000442441 SPOUT1Q5T280 376 aaKnown RBP23.34■■□□□ 1.33
TMEM50B-204ENST00000442441 HEATR3Q7Z4Q2 680 aa23.34■■□□□ 1.33
TMEM50B-204ENST00000442441 TLR9Q9NR96 1032 aa23.34■■□□□ 1.33
TMEM50B-204ENST00000442441 AAASQ9NRG9 546 aa23.34■■□□□ 1.33
TMEM50B-204ENST00000442441 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
TMEM50B-204ENST00000442441 PER2O15055 1255 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 MGEA5O60502 916 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 LIFRP42702 1097 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 SLC26A2P50443 739 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 TMTC3Q6ZXV5 915 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 FBXL6Q8N531 539 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 ATP8B4Q8TF62 1192 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 RPGRIP1Q96KN7 1286 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 ERVK-5Q9HDB9 667 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 GINS2Q9Y248 185 aa23.33■■□□□ 1.33
TMEM50B-204ENST00000442441 USP34Q70CQ2 3546 aa23.32■■□□□ 1.32
TMEM50B-204ENST00000442441 FSD2A1L4K1 749 aa23.32■■□□□ 1.32
TMEM50B-204ENST00000442441 TBKBP1A7MCY6 615 aa23.32■■□□□ 1.32
TMEM50B-204ENST00000442441 RPS6KA5O75582 802 aa23.32■■□□□ 1.32
TMEM50B-204ENST00000442441 ATG7O95352 703 aa23.32■■□□□ 1.32
TMEM50B-204ENST00000442441 ARP10275 920 aa23.32■■□□□ 1.32
TMEM50B-204ENST00000442441 ATF7P17544 494 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms