RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SYF2O95926 243 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 CYP2C8P10632 490 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 SCG2P13521 617 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 NR1D1P20393 614 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CCND1P24385 295 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 SERPINB3P29508 390 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GSTT1P30711 240 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ME1P48163 572 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GNAQP50148 359 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 OXCT1P55809 520 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 BPIFB4P59827 614 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 FKBP4Q02790 459 aaKnown RBP eCLIP3.02□□□□□ -1.93
LIG4-203ENST00000442234 GUCY2DQ02846 1103 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CKAP4Q07065 602 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8FQ08AF8 430 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8DPQ0D2H9 430 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 TBL3Q12788 808 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 NNTQ13423 1086 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PTGISQ16647 500 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PROSER3Q2NL68 480 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 FAM133BQ5BKY9 247 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 TAOK1Q7L7X3 1001 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CACNA2D4Q7Z3S7 1137 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PHLDB2Q86SQ0 1253 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 FCHSD1Q86WN1 690 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GSPT2Q8IYD1 628 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 MSANTD4Q8NCY6 345 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PPFIBP2Q8ND30 876 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 VPS37AQ8NEZ2 397 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.02□□□□□ -1.93
LIG4-203ENST00000442234 MYCBPAPQ8TBZ2 947 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 AGAP11Q8TF27 550 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CDCA5Q96FF9 252 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CSRNP1Q96S65 589 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 SLF1Q9BQI6 1058 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 NAA15Q9BXJ9 866 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 ARHGAP39Q9C0H5 1083 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CCDC68Q9H2F9 335 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 RETREG1Q9H6L5 497 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 METTL14Q9HCE5 456 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 SNRKQ9NRH2 765 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 SAMD15Q9P1V8 674 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 RAB21Q9UL25 225 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 LIMCH1Q9UPQ0 1083 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PLAAQ9Y263 795 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PRRC2BQ5JSZ5 2229 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 ADGRB3O60242 1522 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 POLR3AO14802 1390 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 TMEM247A6NEH6 219 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 TMEM110-MUSTN1A8MSY1 372 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 C3orf80F5H4A9 247 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 DDHD2O94830 711 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 NPTXRO95502 500 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 S100BP04271 92 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 SRGNP10124 158 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 BCRP11274 1271 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CYP19A1P11511 503 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 ATICP31939 592 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CCT6AP40227 531 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 GCGRP47871 477 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 POLR2FP61218 127 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 TUBA1BP68363 451 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 ELF3P78545 371 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 FANCCQ00597 558 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PDE1BQ01064 536 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 EXOSC9Q06265 439 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 IFI16Q16666 785 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 ANKRD20A8PQ5CZ79 823 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 RNF220Q5VTB9 566 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PRPF38BQ5VTL8 546 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 KAZNQ674X7 775 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 CRELD2Q6UXH1 353 aaPredicted RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 TUBA1AQ71U36 451 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 MYO1HQ8N1T3 1032 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 SH2D3CQ8N5H7 860 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 P3H4Q92791 437 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 TSR2Q969E8 191 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 KLHL29Q96CT2 875 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PAWRQ96IZ0 340 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 RPS6KC1Q96S38 1066 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 WRNIP1Q96S55 665 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 SPZ1Q9BXG8 430 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 MIS12Q9H081 205 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PARVBQ9HBI1 364 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PLCB1Q9NQ66 1216 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PCMTD2Q9NV79 361 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 RMND1Q9NWS8 449 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 EURLQ9NYK6 297 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 LARSQ9P2J5 1176 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 ZBTB21Q9ULJ3 1066 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 TTF2Q9UNY4 1162 aaKnown RBP3.02□□□□□ -1.93
LIG4-203ENST00000442234 PTCH2Q9Y6C5 1203 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GLI3P10071 1580 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PIK3C2GO75747 1445 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 VWA3AA6NCI4 1184 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8AA7E2F4 631 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 MGEA5O60502 916 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 PDE5AO76074 875 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 LCA5LO95447 670 aa3.02□□□□□ -1.93
LIG4-203ENST00000442234 FAM107AO95990 144 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms