RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 PRDM11Q9NQV5 511 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ARGLU1Q9NWB6 273 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 TIMM22Q9Y584 194 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 BCL9O00512 1426 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 LRP6O75581 1613 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 NFAT5O94916 1531 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ENO4A6NNW6 628 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 USP17L5A8MUK1 530 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ATP6V1G1O75348 118 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 YY1P25490 414 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 RPL13P26373 211 aaKnown RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 RPIAP49247 311 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 AP3B2Q13367 1082 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 LAMB3Q13751 1172 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 C15orf59Q2T9L4 293 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 MCTP1Q6DN14 999 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 NAA16Q6N069 864 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ALKBH5Q6P6C2 394 aaKnown RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 STRA8Q7Z7C7 330 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 NUTM1Q86Y26 1132 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ANKMY2Q8IV38 441 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 SYTL1Q8IYJ3 562 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 AFAP1L2Q8N4X5 818 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 WNT5BQ9H1J7 359 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 LIN28AQ9H9Z2 209 aaKnown RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ADCY5O95622 1261 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 DNAJB1P25685 340 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 STAT1P42224 750 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 CASP7P55210 303 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 LRP8Q14114 963 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ZNF772Q68DY9 489 aaPredicted RBP11.56□□□□□ -0.56
SYNE2-206ENST00000441438 TLDC1Q6P9B6 456 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 DBX2Q6ZNG2 339 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 SPC24Q8NBT2 197 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 PANK1Q8TE04 598 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 ADPGKQ9BRR6 497 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 TNNQ9UQP3 1299 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 CRYL1Q9Y2S2 319 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
SYNE2-206ENST00000441438 CPP00450 1065 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 ACY1Q03154 408 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 DPYDQ12882 1025 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 DPYSQ14117 519 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 SWI5Q1ZZU3 235 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 GRAMD2AQ8IUY3 354 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 C2orf69Q8N8R5 385 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 CRELD1Q96HD1 420 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 DNAJC18Q9H819 358 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 PCDHGB5Q9Y5G0 923 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.55□□□□□ -0.56
SYNE2-206ENST00000441438 QSER1Q2KHR3 1735 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 SFI1A8K8P3 1242 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 MTSS1O43312 755 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 HNRNPCL1O60812 293 aaKnown RBP11.55□□□□□ -0.56
SYNE2-206ENST00000441438 FAM13AO94988 1023 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 PASD1Q8IV76 773 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 RASEFQ8IZ41 740 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
SYNE2-206ENST00000441438 CRB3Q9BUF7 120 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 NCOR1P1Q9H4R4 102 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 PTBP2Q9UKA9 531 aaKnown RBP11.55□□□□□ -0.56
SYNE2-206ENST00000441438 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
SYNE2-206ENST00000441438 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 DKC1O60832 514 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 LGR5O75473 907 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 RFPL1O75677 317 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 HSPA8P11142 646 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 PHKG2P15735 406 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 PSMA4P25789 261 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 PLTPP55058 493 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 ZBTB46Q86UZ6 589 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 CHFRQ96EP1 664 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 GIMAP5Q96F15 307 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 SLC26A6Q9BXS9 759 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 UPF2Q9HAU5 1272 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 TUBA8Q9NY65 449 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 V9GY48 417 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 GOLGA6L19H0YKK7 550 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 CEP104O60308 925 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 SEC24BO95487 1268 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 THEGLP0DJG4 465 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 NR1H3Q13133 447 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 GALNTL5Q7Z4T8 443 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 FAM186BQ8IYM0 893 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 CCAR2Q8N163 923 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 MKNK1Q9BUB5 465 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 ATP13A1Q9HD20 1204 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 CXXC1Q9P0U4 656 aaPredicted RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 CARD8Q9Y2G2 431 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 ZNF711Q9Y462 761 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 MRFAP1Q9Y605 127 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
SYNE2-206ENST00000441438 EDC4Q6P2E9 1401 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 RNGTTO60942 597 aaKnown RBP11.54□□□□□ -0.56
SYNE2-206ENST00000441438 MAP3K6O95382 1288 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms