RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ANKRD20A1Q5TYW2 823 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 ANKRD20A3Q5VUR7 823 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 PSMD1Q99460 953 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 PHF20Q9BVI0 1012 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 CNTNAP5Q8WYK1 1306 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 CFAP73A6NFT4 308 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 ECHS1P30084 290 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 ZNF268Q14587 947 aaPredicted RBP18.32■□□□□ 0.52
PMS1-213ENST00000441310 CRY2Q49AN0 593 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 SBK1Q52WX2 424 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 CCDC178Q5BJE1 867 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 AGBL2Q5U5Z8 902 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 TTI2Q6NXR4 508 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 TRPM8Q7Z2W7 1104 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 DUSP9Q99956 384 aaKnown RBP18.32■□□□□ 0.52
PMS1-213ENST00000441310 LRRC53A6NM62 1247 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
PMS1-213ENST00000441310 GSTA1P08263 222 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 ERMARDQ5T6L9 678 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 LRRC34Q8IZ02 419 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 FAM129AQ9BZQ8 928 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 RNF14Q9UBS8 474 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 IGF2BP3O00425 579 aaKnown RBP eCLIP18.31■□□□□ 0.52
PMS1-213ENST00000441310 UBOX5O94941 541 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 PYGLP06737 847 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 MMEP08473 750 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 CALM1P0DP23 149 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 CALM2P0DP24 149 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 CALM3P0DP25 149 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 IL17AQ16552 155 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 RTFDC1Q9BY42 306 aaPredicted RBP18.31■□□□□ 0.52
PMS1-213ENST00000441310 NID2Q14112 1375 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 ZNF831Q5JPB2 1677 aa18.31■□□□□ 0.52
PMS1-213ENST00000441310 DDAH1O94760 285 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
PMS1-213ENST00000441310 ATP2B4P23634 1241 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 CWF19L1Q69YN2 538 aaKnown RBP18.3■□□□□ 0.52
PMS1-213ENST00000441310 SAMD15Q9P1V8 674 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 TSKSQ9UJT2 592 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 MYH6P13533 1939 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 DPPA5A6NC42 116 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 A6NHS1 94 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 LDHCP07864 332 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 SLURP2P0DP57 97 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 CHN1P15882 459 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 CCND1P24385 295 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 RCAN1P53805 252 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 ATP2C1P98194 919 aaPredicted RBP18.3■□□□□ 0.52
PMS1-213ENST00000441310 MIIPQ5JXC2 388 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 CNKSR1Q969H4 720 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 VAT1LQ9HCJ6 419 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 BMP15O95972 392 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 SCG2P13521 617 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 GSTO1P78417 241 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 NPY5RQ15761 445 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 PDCD2Q16342 344 aaPredicted RBP18.3■□□□□ 0.52
PMS1-213ENST00000441310 AP1M1Q9BXS5 423 aa18.3■□□□□ 0.52
PMS1-213ENST00000441310 SMIM23A6NLE4 172 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
PMS1-213ENST00000441310 PPP2R5BQ15173 497 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 SLC5A9Q2M3M2 681 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 MTFR1LQ9H019 292 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 ECT2Q9H8V3 914 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 SBF2Q86WG5 1849 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 RTN3O95197 1032 aaPredicted RBP18.29■□□□□ 0.52
PMS1-213ENST00000441310 SCNN1DP51172 638 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 TBC1D25Q3MII6 688 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 ANKRD40Q6AI12 368 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 RPUSD2Q8IZ73 545 aaKnown RBP18.29■□□□□ 0.52
PMS1-213ENST00000441310 USP38Q8NB14 1042 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 INPP4AQ96PE3 977 aaPredicted RBP18.29■□□□□ 0.52
PMS1-213ENST00000441310 PIDD1Q9HB75 910 aa18.29■□□□□ 0.52
PMS1-213ENST00000441310 A0A1W2PQJ5 194 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 HGSO14964 777 aaPredicted RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 BBOX1O75936 387 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 IFNAR2P48551 515 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 NCALDP61601 193 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 MXRA7P84157 204 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 ZNF317Q96PQ6 595 aaPredicted RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 KCNMB3Q9NPA1 279 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 TLDC2A0PJX2 215 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 MAP3K13O43283 966 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 KRT16P08779 473 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 ATP2A2P16615 1042 aaKnown RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 LAMB3Q13751 1172 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 ENOX2Q16206 610 aaKnown RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 G3BP2Q9UN86 482 aaKnown RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 MYH7BA7E2Y1 1941 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 KCNK3O14649 394 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 DAPK3O43293 454 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 LUC7L3O95232 432 aaKnown RBP18.28■□□□□ 0.52
PMS1-213ENST00000441310 APBA3O96018 575 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 FERP16591 822 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 KIF5BP33176 963 aa18.28■□□□□ 0.52
PMS1-213ENST00000441310 DHX9Q08211 1270 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms