RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141	CPE	P16870	476 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	NEK4	P51957	841 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	MLLT6	P55198	1093 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	R3HDM1	Q15032	1099 aa	Known RBP	4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	ARHGAP44	Q17R89	818 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	CFAP100	Q494V2	611 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	SPDYA	Q5MJ70	313 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	STEAP3	Q658P3	488 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	LRRTM3	Q86VH5	581 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	NLRP10	Q86W26	655 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	NLGN4X	Q8N0W4	816 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	FAM177A1	Q8N128	213 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	PCDH19	Q8TAB3	1148 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	ZCRB1	Q8TBF4	217 aa	Known RBP	4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	WNK4	Q96J92	1243 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	TMEM209	Q96SK2	561 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	KCNJ15	Q99712	375 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	CELF4	Q9BZC1	486 aa	Known RBP	4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	SMOC1	Q9H4F8	434 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	IPPK	Q9H8X2	491 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	CABP5	Q9NP86	173 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	SLC6A20	Q9NP91	592 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	DTL	Q9NZJ0	730 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	CROT	Q9UKG9	612 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	ZDHHC9	Q9Y397	364 aa		4.65	□□□□□ -1.67
VPS8-208	ENST00000441141	CCDC66	A2RUB6	948 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	DNAJC6	O75061	913 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	SOX5	P35711	763 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	TGFB2	P61812	414 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	NFATC3	Q12968	1075 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	SART3	Q15020	963 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	GPR19	Q15760	415 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	C21orf62-AS1	Q17RA5	79 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	TM4SF20	Q53R12	229 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	EMC4	Q5J8M3	183 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	CNNM4	Q6P4Q7	775 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	OTOP3	Q7RTS5	596 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	DHX37	Q8IY37	1157 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	SCLY	Q96I15	445 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	WWC2-AS2	Q96NR7	200 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	JAM3	Q9BX67	310 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	SPC25	Q9HBM1	224 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	ING1	Q9UK53	422 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	MAPRE3	Q9UPY8	281 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	ZNF652	Q9Y2D9	606 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	PCDHB4	Q9Y5E5	795 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	TNPO3	Q9Y5L0	923 aa	Known RBP	4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	SBNO2	Q9Y2G9	1366 aa		4.64	□□□□□ -1.67
VPS8-208	ENST00000441141	LOC105371045	A0A1W2PR82	267 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	DNAJC8	O75937	253 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	JMJD7	P0C870	316 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	MYCLP1	P12525	358 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	SDS	P20132	328 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	POU3F2	P20265	443 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	IBSP	P21815	317 aa	Predicted RBP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	DNM2	P50570	870 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	TRMT10B	Q6PF06	316 aa	Known RBP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	FGD2	Q7Z6J4	655 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	KIF18B	Q86Y91	864 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	IGSF22	Q8N9C0	903 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	UHMK1	Q8TAS1	419 aa	Known RBP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	CHAC2	Q8WUX2	184 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	PTPN18	Q99952	460 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	CDIP1	Q9H305	208 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	CAAP1	Q9H8G2	361 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	SAMD15	Q9P1V8	674 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	FBXL7	Q9UJT9	491 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	DSE	Q9UL01	958 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	ZKSCAN5	Q9Y2L8	839 aa		4.63	□□□□□ -1.67
VPS8-208	ENST00000441141	ANKRD62	A6NC57	917 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	PDE8A	O60658	829 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	HIP1R	O75146	1068 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	PYGM	P11217	842 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	GJA4	P35212	333 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	LACTB	P83111	547 aa	Predicted RBP	4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	FHL2	Q14192	279 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	PRKD1	Q15139	912 aa	Predicted RBP	4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	TMEM177	Q53S58	311 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	FIGN	Q5HY92	759 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	PIK3R6	Q5UE93	754 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	TEPP	Q6URK8	271 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	FILIP1	Q7Z7B0	1213 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	C2orf69	Q8N8R5	385 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	ARRDC4	Q8NCT1	418 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	PIP4K2C	Q8TBX8	421 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141		Q8TCH9	128 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	SCYL1	Q96KG9	808 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	MEGF9	Q9H1U4	602 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	MYOT	Q9UBF9	498 aa		4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.62	□□□□□ -1.67
VPS8-208	ENST00000441141	GAS7	O60861	476 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	TADA3	O75528	432 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	PDE6A	P16499	860 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	CNGA1	P29973	690 aa		4.61	□□□□□ -1.67
VPS8-208	ENST00000441141	MASP1	P48740	699 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms