RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZNF746Q6NUN9 644 aaPredicted RBP22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 SWSAP1Q6NVH7 229 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 ABHD15Q6UXT9 468 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 SMAP1Q8IYB5 467 aaPredicted RBP22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 BLIDQ8IZY5 108 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 ATP8B4Q8TF62 1192 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 YME1L1Q96TA2 773 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 INSL6Q9Y581 213 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 TRANK1O15050 2925 aa22.49■■□□□ 1.19
SHROOM1-204ENST00000440118 HBP1O60381 514 aa22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 ATG7O95352 703 aa22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 CIITAP33076 1130 aa22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 TMEM62Q0P6H9 643 aa22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 SCRN1Q12765 414 aa22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 TRMT1LQ7Z2T5 733 aaKnown RBP22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 TBCKQ8TEA7 893 aa22.48■■□□□ 1.19
SHROOM1-204ENST00000440118 NLRC5Q86WI3 1866 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 DHX15O43143 795 aaKnown RBP22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 GAS7O60861 476 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 USP11P51784 963 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 GALNT17Q6IS24 598 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 TSHZ1Q6ZSZ6 1077 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 FAM177A1Q8N128 213 aaPredicted RBP22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 AIFM3Q96NN9 605 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 TGS1Q96RS0 853 aaKnown RBP22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 OSBPL7Q9BZF2 842 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 THEGQ9P2T0 379 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 PCDHA2Q9Y5H9 948 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 PCDHA10Q9Y5I2 948 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 TRPV2Q9Y5S1 764 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 COL1A2P08123 1366 aa22.47■■□□□ 1.19
SHROOM1-204ENST00000440118 IGKV6D-21A0A0A0MT36 114 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 EPOPA6NHQ4 379 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 WDR64B1ANS9 1081 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 CHMP2AO43633 222 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 AK2P54819 239 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 MGAT3Q09327 533 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 LPIN1Q14693 890 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 LRCH2Q5VUJ6 765 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 MTHFD1LQ6UB35 978 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 IL27Q8NEV9 243 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 TEKT3Q9BXF9 490 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 TPCN1Q9ULQ1 816 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 GINS2Q9Y248 185 aa22.46■■□□□ 1.19
SHROOM1-204ENST00000440118 CCDC194A0A1B0GVG4 234 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 LINC01553A4QN01 128 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 PFKFB2O60825 505 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 NONOQ15233 471 aaKnown RBP eCLIP22.45■■□□□ 1.186e-7■■■■□ 20.6
SHROOM1-204ENST00000440118 ZNF484Q5JVG2 852 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 FBXO47Q5MNV8 452 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 SPRED2Q7Z698 418 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 DAGLBQ8NCG7 672 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 GDPD5Q8WTR4 605 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 WASF1Q92558 559 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 PRDM6Q9NQX0 595 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 GABBR1Q9UBS5 961 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 KCNJ14Q9UNX9 436 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 STK36Q9NRP7 1315 aa22.45■■□□□ 1.18
SHROOM1-204ENST00000440118 SMIM35A0A1B0GVV1 85 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 MSH4O15457 936 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 KLRC1P26715 233 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 PAK2Q13177 524 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 GRB10Q13322 594 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 MKRN4PQ13434 485 aaPredicted RBP22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 KRT25Q7Z3Z0 450 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 BBXQ8WY36 941 aaPredicted RBP22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 LENG9Q96B70 501 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 FAM167AQ96KS9 214 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 CEP131Q9UPN4 1083 aa22.44■■□□□ 1.18
SHROOM1-204ENST00000440118 RALGAPA2Q2PPJ7 1873 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 TDP2O95551 362 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 CD52P31358 61 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 JAK3P52333 1124 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 NME8Q8N427 588 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 METTL13Q8N6R0 699 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 TOP1MTQ969P6 601 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 RIT2Q99578 217 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 COL25A1Q9BXS0 654 aaPredicted RBP22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 DISC1Q9NRI5 854 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 ORC3Q9UBD5 711 aaPredicted RBP22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 MTCH2Q9Y6C9 303 aa22.43■■□□□ 1.18
SHROOM1-204ENST00000440118 SFNP31947 248 aa22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 ERVK-21P61565 698 aa22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 HTRA4P83105 476 aaPredicted RBP22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 INF2Q27J81 1249 aa22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 FBXO22Q8NEZ5 403 aa22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 SYMPKQ92797 1274 aaKnown RBP22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 CELF4Q9BZC1 486 aaKnown RBP22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 MAFBQ9Y5Q3 323 aaPredicted RBP22.42■■□□□ 1.18
SHROOM1-204ENST00000440118 IGSF9BQ9UPX0 1349 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 NEK4P51957 841 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 Q4G0T1 1027 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 TJAP1Q5JTD0 557 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 KRT40Q6A162 431 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 SLC5A5Q92911 643 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 FTHL17Q9BXU8 183 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 BRMS1Q9HCU9 246 aa22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 DDX25Q9UHL0 483 aaKnown RBP22.41■■□□□ 1.18
SHROOM1-204ENST00000440118 TTC3P53804 2025 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms