RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 DPF3Q92784 378 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 KAT2BQ92831 832 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 GLT1D1Q96MS3 346 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 GPR20Q99678 358 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 HTATIP2Q9BUP3 242 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 ATP11BQ9Y2G3 1177 aa16.28■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SCN10AQ9Y5Y9 1956 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 A0A087X0B3 334 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SMTNL1A8MU46 457 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 HOXD8P13378 290 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 SNX17Q15036 470 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 IQCB1Q15051 598 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 MTG1Q9BT17 334 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 CCSER1Q9C0I3 900 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 DDX25Q9UHL0 483 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 PCDHA5Q9Y5H7 936 aa16.27■□□□□ 0.2
TNFRSF1A-204ENST00000440083 DNAH12Q6ZR08 3092 aa16.27■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CYP3A7-CYP3A51PA0A087WV96 503 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 A0A0U1RQG5 324 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 IPO5O00410 1097 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MSH4O15457 936 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 DHX15O43143 795 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PQBP1O60828 265 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SLC34A2O95436 690 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CCNE2O96020 404 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 LGALS2P05162 132 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CYP3A7P24462 503 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 AFMP43652 599 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SETQ01105 290 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 DGKDQ16760 1214 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CABP7Q86V35 215 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PAGE5Q96GU1 130 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MBOAT7Q96N66 472 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ZNF577Q9BSK1 485 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MAGEF1Q9HAY2 307 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
TNFRSF1A-204ENST00000440083 NFASCO94856 1347 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MAFGO15525 162 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 EVI5O60447 810 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CABYRO75952 493 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MDM2Q00987 491 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 TLE2Q04725 743 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ITGA7Q13683 1181 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 NBPF20Q3BBV1 942 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 Q4G0T1 1027 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MOXD1Q6UVY6 613 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CALML4Q96GE6 196 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SLC9A2Q9UBY0 812 aa16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ZMYND8Q9ULU4 1186 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1A-204ENST00000440083 GOLGA6L6A8MZA4 724 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ARVCFO00192 962 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 GTPBP6O43824 516 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 KPNA6O60684 536 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 F2P00734 622 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 TCF7P36402 384 aaPredicted RBP16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 TECP42680 631 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 TXKP42681 527 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PSEN2P49810 448 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CDK7P50613 346 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ACTR2P61160 394 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MFSD10Q14728 455 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 E2F4Q16254 413 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 FAM47CQ5HY64 1035 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SH3RF1Q7Z6J0 888 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 DHX40Q8IX18 779 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 ETNPPLQ8TBG4 499 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SLC5A5Q92911 643 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CUEDC2Q9H467 287 aa16.24■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PP2D1A8MPX8 630 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CHMP2AO43633 222 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PPFIA4O75335 1185 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SYN1P17600 705 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PDXDC2PQ6P474 469 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MLKLQ8NB16 471 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SLC43A3Q8NBI5 491 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 SEPT1Q8WYJ6 367 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 MTMR9Q96QG7 549 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 PCYT2Q99447 389 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 TRPV6Q9H1D0 765 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 RMND1Q9NWS8 449 aa16.23■□□□□ 0.19
TNFRSF1A-204ENST00000440083 LRWD1Q9UFC0 647 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms