RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 BCAS4Q8TDM0 211 aa14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 BBXQ8WY36 941 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 ZNF622Q969S3 477 aaKnown RBP eCLIP14.85□□□□□ -0.032e-6■■□□□ 11.7
HERPUD1-204ENST00000439977 LENG9Q96B70 501 aa14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 NUCKS1Q9H1E3 243 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 AIPL1Q9NZN9 384 aa14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 MSH4O15457 936 aa14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 AFPP02771 609 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 HLTFQ14527 1009 aaKnown RBP eCLIP14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 EMBQ6PCB8 327 aa14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 TRMT1LQ7Z2T5 733 aaKnown RBP14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 SYN2Q92777 582 aaPredicted RBP14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 FAM198AQ9UFP1 575 aa14.85□□□□□ -0.03
HERPUD1-204ENST00000439977 NMT1P30419 496 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 RPS6KA1Q15418 735 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 ALKBH5Q6P6C2 394 aaKnown RBP14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 FBXO11Q86XK2 927 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 TPH2Q8IWU9 490 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 SLFN12Q8IYM2 578 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 INPP4AQ96PE3 977 aaPredicted RBP14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 AMNQ9BXJ7 453 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 PCDHGC5Q9Y5F6 944 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 GFPT2O94808 682 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 NDUFB10O96000 172 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 NNTQ13423 1086 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 PLS1Q14651 629 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 COG2Q14746 738 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 CFAP58Q5T655 872 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 TAF4BQ92750 862 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 NAGPAQ9UK23 515 aa14.84□□□□□ -0.03
HERPUD1-204ENST00000439977 MYH7BA7E2Y1 1941 aa14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 ZNF233A6NK53 670 aa14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 NR3C1P04150 777 aa14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 MSL1Q68DK7 614 aa14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 SYT2Q8N9I0 419 aaPredicted RBP14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 RDH13Q8NBN7 331 aa14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 GCNT4Q9P109 453 aa14.83□□□□□ -0.03
HERPUD1-204ENST00000439977 OPA1O60313 960 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 GH2P01242 217 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 RPA1P27694 616 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 MARSP56192 900 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 EDRF1Q3B7T1 1238 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 OR2W6PQ8NHA6 318 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 CCDC17Q96LX7 622 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 DDX47Q9H0S4 455 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 TDRD3Q9H7E2 651 aaKnown RBP14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 TSKSQ9UJT2 592 aa14.83□□□□□ -0.04
HERPUD1-204ENST00000439977 FRMD3A2A2Y4 597 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 TBCAO75347 108 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 CFBP00751 764 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 PPFIA1Q13136 1202 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 HHIPL2Q6UWX4 724 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 MAEAQ7L5Y9 396 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ADAT2Q7Z6V5 191 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 USP38Q8NB14 1042 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ERMNQ8TAM6 284 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 EIF2AK1Q9BQI3 630 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.82□□□□□ -0.043e-6■■■■■ 91.3
HERPUD1-204ENST00000439977 GDF3Q9NR23 364 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 PI4KBQ9UBF8 816 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 CYP3A7-CYP3A51PA0A087WV96 503 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 OPLAHO14841 1288 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 CYP3A7P24462 503 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 GUCY1A3Q02108 690 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 NAA35Q5VZE5 725 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 MAATS1Q7Z4T9 603 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 MYCT1Q8N699 235 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 U2AF1L4Q8WU68 220 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 SH3GL2Q99962 352 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ASTN1O14525 1302 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 A0A1W2PRG0 241 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 GOLGA8KD6RF30 607 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ITGA4P13612 1032 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ABCB4P21439 1286 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ECE1P42892 770 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 RRP1BQ14684 758 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ZYXQ15942 572 aaKnown RBP14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ABCB5Q2M3G0 1257 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 SLC35C1Q96A29 364 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 TRAF3IP3Q9Y228 551 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 RABGAP1Q9Y3P9 1069 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 ZNF831Q5JPB2 1677 aa14.82□□□□□ -0.04
HERPUD1-204ENST00000439977 PAK2Q13177 524 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 CRYGNQ8WXF5 182 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 PIK3R5Q8WYR1 880 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 CAVIN3Q969G5 261 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 OSGEPQ9NPF4 335 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 PITPNM2Q9BZ72 1349 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 SHOX2O60902 331 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 KIF4AO95239 1232 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 HPDP32754 393 aaPredicted RBP14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 ERVK-9P63128 1117 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 EPHA7Q15375 998 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 CCDC174Q6PII3 467 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 FRMD5Q7Z6J6 570 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 IQCKQ8N0W5 287 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 METTL13Q8N6R0 699 aa14.81□□□□□ -0.04
HERPUD1-204ENST00000439977 SEPT11Q9NVA2 429 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms