RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 LLPHQ9BRT6 129 aaKnown RBP27.14■■□□□ 1.94
CPNE1-217ENST00000439669 UNC45AQ9H3U1 944 aa27.14■■□□□ 1.94
CPNE1-217ENST00000439669 SLC37A4O43826 429 aa27.13■■□□□ 1.93
CPNE1-217ENST00000439669 ST18O60284 1047 aa27.13■■□□□ 1.93
CPNE1-217ENST00000439669 GCFC2P16383 781 aaKnown RBP27.13■■□□□ 1.93
CPNE1-217ENST00000439669 JAK3P52333 1124 aa27.13■■□□□ 1.93
CPNE1-217ENST00000439669 WDR5P61964 334 aaKnown RBP27.13■■□□□ 1.93
CPNE1-217ENST00000439669 IKBKEQ14164 716 aa27.13■■□□□ 1.93
CPNE1-217ENST00000439669 EARS2Q5JPH6 523 aaKnown RBP27.13■■□□□ 1.93
CPNE1-217ENST00000439669 RPAINQ86UA6 219 aa27.13■■□□□ 1.93
CPNE1-217ENST00000439669 NKX2-4Q9H2Z4 354 aa27.13■■□□□ 1.93
CPNE1-217ENST00000439669 YBX2Q9Y2T7 364 aaKnown RBP27.13■■□□□ 1.93
CPNE1-217ENST00000439669 MAFBQ9Y5Q3 323 aaPredicted RBP27.13■■□□□ 1.93
CPNE1-217ENST00000439669 ABHD14A-ACY1A0A1B0GW23 586 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 FAM205CA6NFA0 338 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 CCNT1O60563 726 aaKnown RBP27.12■■□□□ 1.93
CPNE1-217ENST00000439669 PSMD10O75832 226 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 SFNP31947 248 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 FAM26DQ5JW98 314 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 DIS3L2Q8IYB7 885 aaKnown RBP27.12■■□□□ 1.93
CPNE1-217ENST00000439669 DBF4BQ8NFT6 615 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 ETNPPLQ8TBG4 499 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 PHOSPHO2Q8TCD6 241 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 NAP1L4Q99733 375 aaKnown RBP27.12■■□□□ 1.93
CPNE1-217ENST00000439669 ZNF576Q9H609 170 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 PCDHA11Q9Y5I1 949 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 IGSF9BQ9UPX0 1349 aa27.12■■□□□ 1.93
CPNE1-217ENST00000439669 COL1A2P08123 1366 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 GBF1Q92538 1859 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 EFCAB14O75071 495 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 CHRNA1P02708 482 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 RPLP2P05387 115 aaKnown RBP27.11■■□□□ 1.93
CPNE1-217ENST00000439669 ATP4AP20648 1035 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 PLEKHG4Q58EX7 1191 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 PPP4R3AQ6IN85 833 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 MIER3Q7Z3K6 550 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 SEPT8Q92599 483 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 TNFRSF25Q93038 417 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 PCDHA2Q9Y5H9 948 aa27.11■■□□□ 1.93
CPNE1-217ENST00000439669 BTBD18B2RXH4 712 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 MYOGP15173 224 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 HMGN5P82970 282 aaKnown RBP27.1■■□□□ 1.93
CPNE1-217ENST00000439669 GUCY1B3Q02153 619 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 ZNF484Q5JVG2 852 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 MTHFD1LQ6UB35 978 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 HERC6Q8IVU3 1022 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 BBXQ8WY36 941 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-217ENST00000439669 C8orf76Q96K31 380 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 CDX2Q99626 313 aaPredicted RBP27.1■■□□□ 1.93
CPNE1-217ENST00000439669 OSBPL7Q9BZF2 842 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 SLC28A3Q9HAS3 691 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 STXBP5LQ9Y2K9 1186 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 CDY2AQ9Y6F7 541 aa27.1■■□□□ 1.93
CPNE1-217ENST00000439669 MYH9P35579 1960 aaKnown RBP27.09■■□□□ 1.93
CPNE1-217ENST00000439669 MARCH6O60337 910 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 GHRP10912 638 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 KLRC1P26715 233 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 DEFB103AP81534 67 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 MRPS6P82932 125 aaKnown RBP27.09■■□□□ 1.93
CPNE1-217ENST00000439669 MGAT3Q09327 533 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 SAFBQ15424 915 aaKnown RBP eCLIP27.09■■□□□ 1.931e-17■■■■□ 20.2
CPNE1-217ENST00000439669 FAM184AQ8NB25 1140 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 RDM1Q8NG50 284 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 FAM167AQ96KS9 214 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 TBC1D32Q96NH3 1257 aa27.09■■□□□ 1.93
CPNE1-217ENST00000439669 KIF28PB7ZC32 967 aa27.08■■□□□ 1.93
CPNE1-217ENST00000439669 M0QZ92 97 aa27.08■■□□□ 1.93
CPNE1-217ENST00000439669 IFIH1Q9BYX4 1025 aaKnown RBP27.08■■□□□ 1.93
CPNE1-217ENST00000439669 SMIM35A0A1B0GVV1 85 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 PRKCEQ02156 737 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 TMEM62Q0P6H9 643 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 GRIN2CQ14957 1233 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 UGCGQ16739 394 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 IER5Q5VY09 327 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 PPP2R2DQ66LE6 453 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 TMCO2Q7Z6W1 182 aaPredicted RBP27.07■■□□□ 1.92
CPNE1-217ENST00000439669 POTEDQ86YR6 584 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 MYLIPQ8WY64 445 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 FAM20AQ96MK3 541 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 ZBED2Q9BTP6 218 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 KCNMB3Q9NPA1 279 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 CEP131Q9UPN4 1083 aa27.07■■□□□ 1.92
CPNE1-217ENST00000439669 LAMA2P24043 3122 aaKnown RBP27.06■■□□□ 1.92
CPNE1-217ENST00000439669 ZBTB42B2RXF5 422 aa27.06■■□□□ 1.92
CPNE1-217ENST00000439669 ZNF862O60290 1169 aa27.06■■□□□ 1.92
CPNE1-217ENST00000439669 OATP04181 439 aa27.06■■□□□ 1.92
CPNE1-217ENST00000439669 APBB2Q92870 758 aa27.06■■□□□ 1.92
CPNE1-217ENST00000439669 TRPV2Q9Y5S1 764 aa27.06■■□□□ 1.92
CPNE1-217ENST00000439669 TBX3O15119 743 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 TLL1O43897 1013 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 AMHP03971 560 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 CA3P07451 260 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 LPIN1Q14693 890 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 B3GNT9Q6UX72 402 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.05■■□□□ 1.921e-8■■□□□ 11.7
CPNE1-217ENST00000439669 IL27Q8NEV9 243 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 NRBP2Q9NSY0 501 aa27.05■■□□□ 1.92
CPNE1-217ENST00000439669 SIP14410 1827 aa27.04■■□□□ 1.92
CPNE1-217ENST00000439669 PTPRSQ13332 1948 aa27.04■■□□□ 1.92
CPNE1-217ENST00000439669 C22orf31O95567 290 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms