RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 SETQ01105 290 aaPredicted RBP23.07■■□□□ 1.28
NCKIPSD-206ENST00000439518 CCDC60Q8IWA6 550 aaPredicted RBP23.07■■□□□ 1.28
NCKIPSD-206ENST00000439518 ZNF577Q9BSK1 485 aa23.07■■□□□ 1.28
NCKIPSD-206ENST00000439518 PPP4R2Q9NY27 417 aa23.07■■□□□ 1.28
NCKIPSD-206ENST00000439518 COL4A4P53420 1690 aaPredicted RBP23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 BACH1O14867 736 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 EDIL3O43854 480 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 UPP2O95045 317 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 IER5Q5VY09 327 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 FAM160B1Q5W0V3 765 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 TSHZ1Q6ZSZ6 1077 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 ATP8B4Q8TF62 1192 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 LENG9Q96B70 501 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 UIMC1Q96RL1 719 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 YME1L1Q96TA2 773 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 C17orf80Q9BSJ5 609 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 AGO3Q9H9G7 860 aaKnown RBP23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 SQORQ9Y6N5 450 aa23.06■■□□□ 1.28
NCKIPSD-206ENST00000439518 SMIM35A0A1B0GVV1 85 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 HBP1O60381 514 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 SSRP1Q08945 709 aaKnown RBP23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 PRR16Q569H4 304 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 ZNF746Q6NUN9 644 aaPredicted RBP23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 SWSAP1Q6NVH7 229 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 MIS18BP1Q6P0N0 1132 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 MTHFD1LQ6UB35 978 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 TRIM22Q8IYM9 498 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 LARP6Q9BRS8 491 aaKnown RBP23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 ZNF302Q9NR11 478 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 COL4A6Q14031 1691 aa23.05■■□□□ 1.28
NCKIPSD-206ENST00000439518 XIRP2A4UGR9 3374 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 ENPP3O14638 875 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 ATP4AP20648 1035 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 KLRC1P26715 233 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 TFF2Q03403 129 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 SKIV2LQ15477 1246 aaKnown RBP23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 PDXDC2PQ6P474 469 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 NME8Q8N427 588 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 PDRG1Q9NUG6 133 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 TRPV2Q9Y5S1 764 aa23.04■■□□□ 1.28
NCKIPSD-206ENST00000439518 COL1A2P08123 1366 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 BRWD1Q9NSI6 2320 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 ZBTB42B2RXF5 422 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 CPLX1O14810 134 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 CD52P31358 61 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 USP11P51784 963 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 NLRP5P59047 1200 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 KRT76Q01546 638 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 ERICH6BQ5W0A0 696 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 FBXO22Q8NEZ5 403 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 SAMD11Q96NU1 681 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 CELF4Q9BZC1 486 aaKnown RBP23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 MAFBQ9Y5Q3 323 aaPredicted RBP23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 KDM3AQ9Y4C1 1321 aa23.03■■□□□ 1.28
NCKIPSD-206ENST00000439518 DEXIO95424 95 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 TMEM62Q0P6H9 643 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 EPC2Q52LR7 807 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 ZNF484Q5JVG2 852 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 SMAP1Q8IYB5 467 aaPredicted RBP23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 LINC01599Q8WXQ3 324 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 IL17RAQ96F46 866 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 COG5Q9UP83 839 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 PCDHA10Q9Y5I2 948 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 IGSF9BQ9UPX0 1349 aa23.02■■□□□ 1.28
NCKIPSD-206ENST00000439518 MUC3AQ02505 3323 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 M0QZ92 97 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 M0R2N6 131 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 BMP1P13497 986 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 STK3Q13188 491 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 NPY5RQ15761 445 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 AAK1Q2M2I8 961 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 RTN4RL1Q86UN2 441 aaPredicted RBP23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 KIAA0319LQ8IZA0 1049 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 FAM177A1Q8N128 213 aaPredicted RBP23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 ADAMTS19Q8TE59 1207 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 PCDHA4Q9UN74 947 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 TTC3P53804 2025 aa23.01■■□□□ 1.27
NCKIPSD-206ENST00000439518 MSH4O15457 936 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 PSAPP07602 524 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 CPLX2Q6PUV4 134 aaKnown RBP23■■□□□ 1.27
NCKIPSD-206ENST00000439518 TMEM192Q8IY95 271 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 CRIPAKQ8N1N5 446 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 TBCKQ8TEA7 893 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 BBXQ8WY36 941 aaPredicted RBP23■■□□□ 1.27
NCKIPSD-206ENST00000439518 RIT2Q99578 217 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 RC3H2Q9HBD1 1191 aaKnown RBP23■■□□□ 1.27
NCKIPSD-206ENST00000439518 TCEAL9Q9UHQ7 104 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 PADI3Q9ULW8 664 aa23■■□□□ 1.27
NCKIPSD-206ENST00000439518 CKAP2LQ8IYA6 745 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 BLIDQ8IZY5 108 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 DAGLBQ8NCG7 672 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 SLC5A5Q92911 643 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 HLA-CQ95604 372 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 AIFM3Q96NN9 605 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 FTHL17Q9BXU8 183 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 C22orf23Q9BZE7 217 aa22.99■■□□□ 1.27
NCKIPSD-206ENST00000439518 WDR64B1ANS9 1081 aa22.98■■□□□ 1.27
NCKIPSD-206ENST00000439518 H3BNC9 293 aa22.98■■□□□ 1.27
NCKIPSD-206ENST00000439518 C22orf31O95567 290 aa22.98■■□□□ 1.27
NCKIPSD-206ENST00000439518 LINC00271P0C7V0 271 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms