RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FAM26DQ5JW98 314 aa27.93■■■□□ 2.06
RAPGEF1-206ENST00000438647 RUFY4Q6ZNE9 571 aa27.93■■■□□ 2.06
RAPGEF1-206ENST00000438647 RDM1Q8NG50 284 aa27.93■■■□□ 2.06
RAPGEF1-206ENST00000438647 ETNPPLQ8TBG4 499 aa27.93■■■□□ 2.06
RAPGEF1-206ENST00000438647 COL1A2P08123 1366 aa27.93■■■□□ 2.06
RAPGEF1-206ENST00000438647 CCNT1O60563 726 aaKnown RBP27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 PBX2P40425 430 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 NR5A1Q13285 461 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 SAFBQ15424 915 aaKnown RBP eCLIP27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 ZNF484Q5JVG2 852 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 KRT40Q6A162 431 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 DIS3L2Q8IYB7 885 aaKnown RBP27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 BBXQ8WY36 941 aaPredicted RBP27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 FAM167AQ96KS9 214 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 TTYH1Q9H313 450 aaPredicted RBP27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 GABBR1Q9UBS5 961 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 PCDHA2Q9Y5H9 948 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 PCDHA11Q9Y5I1 949 aa27.92■■■□□ 2.06
RAPGEF1-206ENST00000438647 CHMP2AO43633 222 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 PLEKHG4Q58EX7 1191 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 DNAJB3Q8WWF6 145 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 SEPT8Q92599 483 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 TNFRSF25Q93038 417 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 FAM20AQ96MK3 541 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 UNC45AQ9H3U1 944 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 CEP131Q9UPN4 1083 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 IGSF9BQ9UPX0 1349 aa27.91■■■□□ 2.06
RAPGEF1-206ENST00000438647 SLC37A4O43826 429 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 FOSBP53539 338 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 WDR5P61964 334 aaKnown RBP27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 FAM184AQ8NB25 1140 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 DBF4BQ8NFT6 615 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 TRAPPC12Q8WVT3 735 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 C8orf76Q96K31 380 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 TBC1D32Q96NH3 1257 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 FAM49AQ9H0Q0 323 aaPredicted RBP27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 ZNF576Q9H609 170 aa27.9■■■□□ 2.06
RAPGEF1-206ENST00000438647 SMIM35A0A1B0GVV1 85 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 BTBD18B2RXH4 712 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 KIF28PB7ZC32 967 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 M0QZ92 97 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 TBX3O15119 743 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 ATP4AP20648 1035 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 IER5Q5VY09 327 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 MTHFD1LQ6UB35 978 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 MIER3Q7Z3K6 550 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 APBB2Q92870 758 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 GJA10Q969M2 543 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 GUCD1Q96NT3 240 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 KCNMB3Q9NPA1 279 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 STXBP5LQ9Y2K9 1186 aa27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 MYH9P35579 1960 aaKnown RBP27.89■■■□□ 2.06
RAPGEF1-206ENST00000438647 MARCH6O60337 910 aa27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 CHRNA1P02708 482 aa27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 RABGGTBP53611 331 aa27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 EARS2Q5JPH6 523 aaKnown RBP27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 HERC6Q8IVU3 1022 aa27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 NME8Q8N427 588 aa27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 SLC28A3Q9HAS3 691 aa27.88■■■□□ 2.05
RAPGEF1-206ENST00000438647 KLRC1P26715 233 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 MCM2P49736 904 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 MRPS6P82932 125 aaKnown RBP27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 MGAT3Q09327 533 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 B3GNT9Q6UX72 402 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 IFIH1Q9BYX4 1025 aaKnown RBP27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 NRBP2Q9NSY0 501 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 CDY2AQ9Y6F7 541 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 CDH23Q9H251 3354 aa27.87■■■□□ 2.05
RAPGEF1-206ENST00000438647 SLFN12Q8IYM2 578 aa27.86■■■□□ 2.05
RAPGEF1-206ENST00000438647 ZBTB10Q96DT7 871 aa27.86■■■□□ 2.05
RAPGEF1-206ENST00000438647 CDX2Q99626 313 aaPredicted RBP27.86■■■□□ 2.05
RAPGEF1-206ENST00000438647 NKX2-4Q9H2Z4 354 aa27.86■■■□□ 2.05
RAPGEF1-206ENST00000438647 YBX2Q9Y2T7 364 aaKnown RBP27.86■■■□□ 2.05
RAPGEF1-206ENST00000438647 FAM205CA6NFA0 338 aa27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 BAG4O95429 457 aaKnown RBP27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 OATP04181 439 aa27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 PRKCEQ02156 737 aa27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 PPP2R5CQ13362 524 aa27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 TCTN1Q2MV58 587 aa27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 TRMT1LQ7Z2T5 733 aaKnown RBP27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 KIF3AQ9Y496 699 aa27.85■■■□□ 2.05
RAPGEF1-206ENST00000438647 ZBTB42B2RXF5 422 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 MAGEB2O15479 319 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 AMHP03971 560 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 GHRP10912 638 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 DEFB103AP81534 67 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 GUCY1B3Q02153 619 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 PPP2R2DQ66LE6 453 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 POTEDQ86YR6 584 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 USP38Q8NB14 1042 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 FBXO18Q8NFZ0 1043 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 ZBED2Q9BTP6 218 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 TRPV2Q9Y5S1 764 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 SQORQ9Y6N5 450 aa27.84■■■□□ 2.05
RAPGEF1-206ENST00000438647 TLL1O43897 1013 aa27.83■■■□□ 2.05
RAPGEF1-206ENST00000438647 ZNF862O60290 1169 aa27.83■■■□□ 2.05
RAPGEF1-206ENST00000438647 FBXO47Q5MNV8 452 aa27.83■■■□□ 2.05
RAPGEF1-206ENST00000438647 COL6A3P12111 3177 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 C22orf31O95567 290 aa27.82■■■□□ 2.04
RAPGEF1-206ENST00000438647 LPIN1Q14693 890 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms