RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TBKBP1A7MCY6 615 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 SCG2P13521 617 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 NRLP54845 237 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 RTN4RL1Q86UN2 441 aaPredicted RBP13.21□□□□□ -0.29
RTN4-211ENST00000438462 CABP7Q86V35 215 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 MRPL43Q8N983 215 aaKnown RBP13.21□□□□□ -0.29
RTN4-211ENST00000438462 GMCL1P1Q8NEA9 526 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 OSBPL6Q9BZF3 934 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 RNPEPQ9H4A4 650 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 SFXN1Q9H9B4 322 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 LTB4R2Q9NPC1 389 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 EPS15L1Q9UBC2 864 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 LRFN2Q9ULH4 789 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 PIEZO2Q9H5I5 2752 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 DOCK8Q8NF50 2099 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 CAPNS1P04632 268 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 LAG3P18627 525 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 MGAT3Q09327 533 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 MTAPQ13126 283 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 SRSF5Q13243 272 aaKnown RBP13.2□□□□□ -0.3
RTN4-211ENST00000438462 MLF2Q15773 248 aaPredicted RBP13.2□□□□□ -0.3
RTN4-211ENST00000438462 SH3PXD2AQ5TCZ1 1133 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 DNERQ8NFT8 737 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
RTN4-211ENST00000438462 NXPE3Q969Y0 559 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
RTN4-211ENST00000438462 MKNK1Q9BUB5 465 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 TYW1Q9NV66 732 aaKnown RBP13.2□□□□□ -0.3
RTN4-211ENST00000438462 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
RTN4-211ENST00000438462 LAMA1P25391 3075 aa13.2□□□□□ -0.3
RTN4-211ENST00000438462 PTPRCP08575 1304 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 PRKAB2O43741 272 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 ICAM1P05362 532 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 CD72P21854 359 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
RTN4-211ENST00000438462 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 AMOTL1Q8IY63 956 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 FAM160A2Q8N612 972 aaPredicted RBP13.19□□□□□ -0.3
RTN4-211ENST00000438462 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
RTN4-211ENST00000438462 SLC39A7Q92504 469 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 KLHL5Q96PQ7 755 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 MYADMQ96S97 322 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 CLMPQ9H6B4 373 aa13.19□□□□□ -0.3
RTN4-211ENST00000438462 B4DLN1 442 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 SORBS3O60504 671 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 ZNF806P0C7X5 589 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 RASA1P20936 1047 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 TARSP26639 723 aaKnown RBP13.18□□□□□ -0.3
RTN4-211ENST00000438462 CD52P31358 61 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 PBX3P40426 434 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
RTN4-211ENST00000438462 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
RTN4-211ENST00000438462 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 TNNI3KQ59H18 835 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 ZBTB41Q5SVQ8 909 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 CLDN23Q96B33 292 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
RTN4-211ENST00000438462 C16orf70Q9BSU1 422 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 ARRDC1-AS1Q9H2J1 176 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 CWH43Q9H720 699 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 AGO3Q9H9G7 860 aaKnown RBP13.18□□□□□ -0.3
RTN4-211ENST00000438462 SETD4Q9NVD3 440 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 DDX41Q9UJV9 622 aaKnown RBP13.18□□□□□ -0.3
RTN4-211ENST00000438462 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 FPGT-TNNI3KV9GXZ4 949 aa13.18□□□□□ -0.3
RTN4-211ENST00000438462 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 HRO43593 1189 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 PRKCQQ04759 706 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 GLG1Q92896 1179 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 FTHL17Q9BXU8 183 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
RTN4-211ENST00000438462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.16□□□□□ -0.3
RTN4-211ENST00000438462 H3BRB1 525 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 PPFIA4O75335 1185 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 SLC1A4P43007 532 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 RPS9P46781 194 aaKnown RBP13.16□□□□□ -0.3
RTN4-211ENST00000438462 GPC5P78333 572 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 KRT17Q04695 432 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 HTR4Q13639 388 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 HSDL1Q3SXM5 330 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 FAM102BQ5T8I3 360 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 KCTD1Q719H9 257 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 MKL1Q969V6 931 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
RTN4-211ENST00000438462 TUT1Q9H6E5 874 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms