RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 HHIPL2Q6UWX4 724 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 ARL8AQ96BM9 186 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 IKZF4Q9H2S9 585 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 DNAJC18Q9H819 358 aa18.32■□□□□ 0.52
TTC3-209ENST00000438055 AGPSO00116 658 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 MEIS2O14770 477 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 AKAP3O75969 853 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 MMP10P09238 476 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 NMT1P30419 496 aaKnown RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 USP8P40818 1118 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 ARHGAP44Q17R89 818 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 NAA35Q5VZE5 725 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 ADAT2Q7Z6V5 191 aaKnown RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 DAAM2Q86T65 1068 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 KCNMB3Q9NPA1 279 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 FEZ2Q9UHY8 353 aaPredicted RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 BCS1LQ9Y276 419 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 AFF2P51816 1311 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 NPR1P16066 1061 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 HS2ST1Q7LGA3 356 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 CSRNP1Q96S65 589 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 RUSC1Q9BVN2 902 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 KCTD10Q9H3F6 313 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 H2AFZP0C0S5 128 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 SLC12A3P55017 1021 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 ASTE1Q2TB18 679 aaPredicted RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 ODF2Q5BJF6 829 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 H2AFVQ71UI9 128 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 ZNF571Q7Z3V5 609 aaPredicted RBP18.31■□□□□ 0.52
TTC3-209ENST00000438055 NAV1Q8NEY1 1877 aa18.31■□□□□ 0.52
TTC3-209ENST00000438055 VGLL3A8MV65 326 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 GOLGA8KD6RF30 607 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 EBAG9O00559 213 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 PPFIA4O75335 1185 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 LCA5LO95447 670 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 PDCLQ13371 301 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 ZC2HC1CQ53FD0 456 aaPredicted RBP18.3■□□□□ 0.52
TTC3-209ENST00000438055 TMEM179Q6ZVK1 233 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 EIF2AK1Q9BQI3 630 aaKnown RBP18.3■□□□□ 0.52
TTC3-209ENST00000438055 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 SAMM50Q9Y512 469 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 TCP10L2B9ZVM9 353 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 FOSP01100 380 aaPredicted RBP18.3■□□□□ 0.52
TTC3-209ENST00000438055 FAM153BP0C7A2 387 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 RPA1P27694 616 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 NOVP48745 357 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 FAM153CQ494X1 144 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 LRCH2Q5VUJ6 765 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 FAM153AQ9UHL3 310 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 MSH4O15457 936 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 NNTQ13423 1086 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 ZIM3Q96PE6 472 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 PLIN4Q96Q06 1357 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 NYAP2Q9P242 653 aa18.3■□□□□ 0.52
TTC3-209ENST00000438055 CLRN2A0PK11 232 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 GRID2IPA4D2P6 1211 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 ZBTB39O15060 712 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 TRADDQ15628 312 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 FAM186BQ8IYM0 893 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 SYN2Q92777 582 aaPredicted RBP18.29■□□□□ 0.52
TTC3-209ENST00000438055 RNF14Q9UBS8 474 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 KRIT1O00522 736 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 GAS7O60861 476 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 CLSTN1O94985 981 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 CEP85LQ5SZL2 805 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 DDX47Q9H0S4 455 aaKnown RBP18.29■□□□□ 0.52
TTC3-209ENST00000438055 GOLGB1Q14789 3259 aaKnown RBP18.29■□□□□ 0.52
TTC3-209ENST00000438055 NDUFAB1O14561 156 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 PON1P27169 355 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 STAT1P42224 750 aa18.29■□□□□ 0.52
TTC3-209ENST00000438055 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
TTC3-209ENST00000438055 SYT2Q8N9I0 419 aaPredicted RBP18.29■□□□□ 0.52
TTC3-209ENST00000438055 METTL14Q9HCE5 456 aaKnown RBP18.29■□□□□ 0.52
TTC3-209ENST00000438055 COL5A3P25940 1745 aaPredicted RBP18.28■□□□□ 0.52
TTC3-209ENST00000438055 RREB1Q92766 1687 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 PITPNM2Q9BZ72 1349 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 RAD51CO43502 376 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 PDE4CQ08493 712 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 FRMD5Q7Z6J6 570 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 FAM178BQ8IXR5 827 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 NLGN1Q8N2Q7 840 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 DYDC2Q96IM9 177 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 TYW1Q9NV66 732 aaKnown RBP18.28■□□□□ 0.52
TTC3-209ENST00000438055 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
TTC3-209ENST00000438055 PODNQ7Z5L7 613 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 DDX42Q86XP3 938 aaKnown RBP eCLIP18.28■□□□□ 0.52
TTC3-209ENST00000438055 FRMD4BQ9Y2L6 1034 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 EML1O00423 815 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 LRRN2O75325 713 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 TRIM49P0CI25 452 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 TRIM49CP0CI26 452 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 PDE6BP35913 854 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 IRAK1P51617 712 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 ODR4Q5SWX8 454 aa18.28■□□□□ 0.52
TTC3-209ENST00000438055 UBLCP1Q8WVY7 318 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms