RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 SLC26A2P50443 739 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 TMEM62Q0P6H9 643 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 KRT25Q7Z3Z0 450 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 RPAINQ86UA6 219 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 MYOCDQ8IZQ8 938 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 FAM177A1Q8N128 213 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-207ENST00000436324 OXER1Q8TDS5 423 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 ATP8B4Q8TF62 1192 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 PPM1EQ8WY54 764 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 GTF3C6Q969F1 213 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 GABBR1Q9UBS5 961 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 PCDHA10Q9Y5I2 948 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 CDY2AQ9Y6F7 541 aa20.72■□□□□ 0.91
HMGN1-207ENST00000436324 KAT6AQ92794 2004 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 CCDC194A0A1B0GVG4 234 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 LCHNA4D1U4 455 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 RFXAPO00287 272 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 GAS7O60861 476 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 AMHP03971 560 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 FDPSP14324 419 aaKnown RBP20.71■□□□□ 0.91
HMGN1-207ENST00000436324 MRPS6P82932 125 aaKnown RBP20.71■□□□□ 0.91
HMGN1-207ENST00000436324 TAP1Q03518 808 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 MGAT3Q09327 533 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 ADGRE1Q14246 886 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 LRCH2Q5VUJ6 765 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 MTHFD1LQ6UB35 978 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 SMAP1Q8IYB5 467 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-207ENST00000436324 WASF1Q92558 559 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 SLC5A5Q92911 643 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 IFIH1Q9BYX4 1025 aaKnown RBP20.71■□□□□ 0.91
HMGN1-207ENST00000436324 PCDHA2Q9Y5H9 948 aa20.71■□□□□ 0.91
HMGN1-207ENST00000436324 JAK2O60674 1132 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 GJB5O95377 273 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 KLRC1P26715 233 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 LPIN1Q14693 890 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 LETM2Q2VYF4 491 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 Q4G0T1 1027 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 SPRED2Q7Z698 418 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 NSUN7Q8NE18 718 aaKnown RBP20.7■□□□□ 0.9
HMGN1-207ENST00000436324 ARNTL2Q8WYA1 636 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 TEKT3Q9BXF9 490 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 UNC45AQ9H3U1 944 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 DISC1Q9NRI5 854 aa20.7■□□□□ 0.9
HMGN1-207ENST00000436324 LAMA2P24043 3122 aaKnown RBP20.7■□□□□ 0.9
HMGN1-207ENST00000436324 CYP3A7-CYP3A51PA0A087WV96 503 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 WDR64B1ANS9 1081 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 UPP2O95045 317 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 CYP3A7P24462 503 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 ZNF484Q5JVG2 852 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 PIK3AP1Q6ZUJ8 805 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 RIT2Q99578 217 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 RAD9AQ99638 391 aa20.69■□□□□ 0.9
HMGN1-207ENST00000436324 DDX25Q9UHL0 483 aaKnown RBP20.69■□□□□ 0.9
HMGN1-207ENST00000436324 MAFBQ9Y5Q3 323 aaPredicted RBP20.69■□□□□ 0.9
HMGN1-207ENST00000436324 SMIM35A0A1B0GVV1 85 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-207ENST00000436324 EPOPA6NHQ4 379 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 M0QZ92 97 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 MKRN4PQ13434 485 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-207ENST00000436324 CCDC85BQ15834 202 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-207ENST00000436324 FBXO47Q5MNV8 452 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 IER5Q5VY09 327 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 BBXQ8WY36 941 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-207ENST00000436324 APBB2Q92870 758 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 TRPV2Q9Y5S1 764 aa20.68■□□□□ 0.9
HMGN1-207ENST00000436324 ZBTB42B2RXF5 422 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 SLC37A4O43826 429 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 PSMD10O75832 226 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 ST3GAL1Q11201 340 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 EARS2Q5JPH6 523 aaKnown RBP20.67■□□□□ 0.9
HMGN1-207ENST00000436324 MIER3Q7Z3K6 550 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 MICALL1Q8N3F8 863 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 USP38Q8NB14 1042 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 MBOAT7Q96N66 472 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 AGO3Q9H9G7 860 aaKnown RBP20.67■□□□□ 0.9
HMGN1-207ENST00000436324 MTUS1Q9ULD2 1270 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 LIMCH1Q9UPQ0 1083 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 GINS2Q9Y248 185 aa20.67■□□□□ 0.9
HMGN1-207ENST00000436324 PTPRSQ13332 1948 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 FAM205CA6NFA0 338 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 RPLP2P05387 115 aaKnown RBP20.66■□□□□ 0.9
HMGN1-207ENST00000436324 CD52P31358 61 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 KRT2P35908 639 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 JAK3P52333 1124 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 NR5A1Q13285 461 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 UGCGQ16739 394 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 MOXD1Q6UVY6 613 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 NEK8Q86SG6 692 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 CCDC83Q8IWF9 413 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.66■□□□□ 0.9
HMGN1-207ENST00000436324 METTL13Q8N6R0 699 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 ETNPPLQ8TBG4 499 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 PPP1R16BQ96T49 567 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 CELF4Q9BZC1 486 aaKnown RBP20.66■□□□□ 0.9
HMGN1-207ENST00000436324 COL1A2P08123 1366 aa20.66■□□□□ 0.9
HMGN1-207ENST00000436324 IGSF9BQ9UPX0 1349 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 ZNF862O60290 1169 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
HMGN1-207ENST00000436324 SFNP31947 248 aa20.65■□□□□ 0.9
HMGN1-207ENST00000436324 PRKCEQ02156 737 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms