RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P4-201ENST00000435997 CLDND1Q9NY35 253 aa12.52□□□□□ -0.41
SPTLC1P4-201ENST00000435997 PLAGL2Q9UPG8 496 aa12.52□□□□□ -0.41
SPTLC1P4-201ENST00000435997 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TRPV2Q9Y5S1 764 aa12.52□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ATG2AQ2TAZ0 1938 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SMIM35A0A1B0GVV1 85 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 STXBP3O00186 592 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MEIS1O00470 390 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 CCNE2O96020 404 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ARP10275 920 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ALADP13716 330 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SSTR3P32745 418 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SLC26A2P50443 739 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 IGBP1P78318 339 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 AP3B2Q13367 1082 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TSGA10IPQ3SY00 556 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 IER5Q5VY09 327 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ADHFE1Q8IWW8 467 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TRAPPC12Q8WVT3 735 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FAM49AQ9H0Q0 323 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 AZI2Q9H6S1 392 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 BARHL2Q9NY43 387 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 BRPF3Q9ULD4 1205 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 PADI3Q9ULW8 664 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FAM50BQ9Y247 325 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NLRC5Q86WI3 1866 aa12.51□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ZBTB42B2RXF5 422 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 DCXO43602 365 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FOSP01100 380 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ITGB1P05556 798 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 DNAJB1P25685 340 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 STAT5BP51692 787 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NAPAP54920 295 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 IRX6P78412 446 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 RTN1Q16799 776 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NAALADL2Q58DX5 795 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MTHFD1LQ6UB35 978 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TNPO1Q92973 898 aaKnown RBP12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MSLNLQ96KJ4 702 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 CELF4Q9BZC1 486 aaKnown RBP12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NID2Q14112 1375 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MUC6Q6W4X9 2439 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MYO7AQ13402 2215 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 COL1A2P08123 1366 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 IGLV3-22A0A075B6J6 115 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FAM86B1E9PN63 330 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 HAX1O00165 279 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 DHX15O43143 795 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 MBTPS2O43462 519 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 EYA4O95677 639 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 FAM86B2P0C5J1 330 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SCG2P13521 617 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ADCY7P51828 1080 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TMEM62Q0P6H9 643 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 PAK2Q13177 524 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ABHD15Q6UXT9 468 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 DHX32Q7L7V1 743 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 NME8Q8N427 588 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SPPL3Q8TCT6 385 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ATP8B4Q8TF62 1192 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TMEM40Q8WWA1 233 aa12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ALG13Q9NP73 1137 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ESYT2A0FGR8 921 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 M0QZ92 97 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 LINC01565O15544 149 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ZBTB43O43298 467 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 HBP1O60381 514 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 CDC27P30260 824 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 IRS1P35568 1242 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SARSP49591 514 aaKnown RBP12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 GATMP50440 423 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 KRT76Q01546 638 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ADCK5Q3MIX3 580 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ADGRD2Q7Z7M1 963 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 KIAA0319LQ8IZA0 1049 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 SMRP1Q8NCR6 262 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TCEANC2Q96MN5 208 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 GLT8D2Q9H1C3 349 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 ERVK-5Q9HDB9 667 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 TMEM260Q9NX78 707 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 CLEC1BQ9P126 229 aa12.48□□□□□ -0.41
SPTLC1P4-201ENST00000435997 V9GY48 417 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms