RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 DBR1Q9UK59 544 aaKnown RBP12.09□□□□□ -0.47
CPNE1-214ENST00000435747 DUSP12Q9UNI6 340 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
CPNE1-214ENST00000435747 EIF3JO75822 258 aaKnown RBP12.08□□□□□ -0.48
CPNE1-214ENST00000435747 FGF18O76093 207 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 PDHBP11177 359 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 MFAP1P55081 439 aaKnown RBP12.08□□□□□ -0.48
CPNE1-214ENST00000435747 TBC1D8BQ0IIM8 1120 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 LPIN1Q14693 890 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 MYSM1Q5VVJ2 828 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 MFSD6Q6ZSS7 791 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 THNSL1Q8IYQ7 743 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 CRIPAKQ8N1N5 446 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 RMDN3Q96TC7 470 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 EHMT1Q9H9B1 1298 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 ENTPD7Q9NQZ7 604 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 CYP26B1Q9NR63 512 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 SETD4Q9NVD3 440 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 USP18Q9UMW8 372 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 FNDC1Q4ZHG4 1894 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-214ENST00000435747 WDR19Q8NEZ3 1342 aa12.08□□□□□ -0.48
CPNE1-214ENST00000435747 HIP1O00291 1037 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 GGPS1O95749 300 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 WEE2P0C1S8 567 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 NT5C2P49902 561 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-214ENST00000435747 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 USH1GQ495M9 461 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 RRP12Q5JTH9 1297 aaKnown RBP12.07□□□□□ -0.48
CPNE1-214ENST00000435747 CELF3Q5SZQ8 465 aaKnown RBP12.07□□□□□ -0.48
CPNE1-214ENST00000435747 C1orf210Q8IVY1 113 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 SYTL5Q8TDW5 730 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-214ENST00000435747 LINC01599Q8WXQ3 324 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 TCF25Q9BQ70 676 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 GPCPD1Q9NPB8 672 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 ANGPTL2Q9UKU9 493 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 LOXHD1Q8IVV2 1947 aa12.07□□□□□ -0.48
CPNE1-214ENST00000435747 FRMPD2Q68DX3 1309 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-214ENST00000435747 SPEGQ15772 3267 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 ZNF213O14771 459 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 SPTLC1O15269 473 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 EOMESO95936 686 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 LGALS2P05162 132 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 EIF2AK2P19525 551 aaKnown RBP12.06□□□□□ -0.48
CPNE1-214ENST00000435747 GATMP50440 423 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 ARHGAP4P98171 946 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 ZNF543Q08ER8 600 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 ATAT1Q5SQI0 421 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
CPNE1-214ENST00000435747 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 KIAA1841Q6NSI8 718 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 RUFY4Q6ZNE9 571 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 TSHZ1Q6ZSZ6 1077 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 DGKHQ86XP1 1220 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 ACSF2Q96CM8 615 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-214ENST00000435747 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-214ENST00000435747 PUF60Q9UHX1 559 aaKnown RBP12.06□□□□□ -0.48
CPNE1-214ENST00000435747 LRFN2Q9ULH4 789 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 DENND4AQ7Z401 1863 aa12.06□□□□□ -0.48
CPNE1-214ENST00000435747 SOBPA7XYQ1 873 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 HIDE1A8MVS5 230 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 DCNP07585 359 aaKnown RBP12.05□□□□□ -0.48
CPNE1-214ENST00000435747 SCG2P13521 617 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 MGAT3Q09327 533 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 FBXO47Q5MNV8 452 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 KCNV1Q6PIU1 500 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 RSPH3Q86UC2 560 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 ESR2Q92731 530 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 BORCS6Q96GS4 357 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 ZKSCAN3Q9BRR0 538 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 FTHL17Q9BXU8 183 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 TBC1D17Q9HA65 648 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 MLXIPQ9HAP2 919 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 NGRNQ9NPE2 291 aaKnown RBP12.05□□□□□ -0.48
CPNE1-214ENST00000435747 TOMM22Q9NS69 142 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 COL20A1Q9P218 1284 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 WNT16Q9UBV4 365 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 LZTS1Q9Y250 596 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 HCFC2Q9Y5Z7 792 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 MYH6P13533 1939 aa12.05□□□□□ -0.48
CPNE1-214ENST00000435747 ASH1LQ9NR48 2969 aaKnown RBP12.05□□□□□ -0.48
CPNE1-214ENST00000435747 NAV2Q8IVL1 2488 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 MIA3Q5JRA6 1907 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 KRBA1A5PL33 1030 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 B4E1Z4 1266 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 NR3C2P08235 984 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 CFHP08603 1231 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 IBSPP21815 317 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-214ENST00000435747 KCNA4P22459 653 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 CHMLP26374 656 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
CPNE1-214ENST00000435747 RTN4RL1Q86UN2 441 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-214ENST00000435747 ENAHQ8N8S7 591 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms