RNA–Protein interactions for RNA: ENST00000434140.5

ALS2CL-206, Transcript of ALS2 C-terminal like, humanhuman

TSL 1 (best)

Gene ALS2CL, Length 3,937 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CL-206ENST00000434140 PCDHA6Q9UN73 950 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 PCDHA8Q9Y5H6 950 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 NRXN3Q9Y4C0 1643 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 LGR5O75473 907 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 USP17L8P0C7I0 530 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 SLC9A1P19634 815 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 SSR1P43307 286 aaKnown RBP12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 ZNF131P52739 623 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 EIF3BP55884 814 aaKnown RBP12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 BYSLQ13895 437 aaKnown RBP12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 EPS8L3Q8TE67 593 aaKnown RBP12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 FAM129AQ9BZQ8 928 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 CCSER1Q9C0I3 900 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 CTTNBP2NLQ9P2B4 639 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 SLC12A6Q9UHW9 1150 aa12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 ATXN2Q99700 1313 aaKnown RBP12.15□□□□□ -0.46
ALS2CL-206ENST00000434140 TNS3Q68CZ2 1445 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 CFAP73A6NFT4 308 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 F8VZ95 297 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 CSF1RP07333 972 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 FIGNQ5HY92 759 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 CAPN12Q6ZSI9 719 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 NBPF5PQ86XG9 351 aaPredicted RBP12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 EGFL6Q8IUX8 553 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 TMEM260Q9NX78 707 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 G3BP2Q9UN86 482 aaKnown RBP12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.47
ALS2CL-206ENST00000434140 KCNQ2O43526 872 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 MGRN1O60291 552 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 PLCG2P16885 1265 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 NR2F2P24468 414 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 TRIP13Q15645 432 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 MREGQ8N565 214 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 INPP4AQ96PE3 977 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 ARMCX3Q9UH62 379 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 CHORDC1Q9UHD1 332 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 KDM6AO15550 1401 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 CCDC188H7C350 402 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 KIF3CO14782 793 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 DNAJC8O75937 253 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 LONRF1Q17RB8 773 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 CCDC65Q8IXS2 484 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 PNMA3Q9UL41 463 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 TNFRSF8P28908 595 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 CHRNDQ07001 517 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 TMED8Q6PL24 325 aaPredicted RBP12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 KRT25Q7Z3Z0 450 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 SYCE1Q8N0S2 351 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 FBXO25Q8TCJ0 367 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 BAP1Q92560 729 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 TRIM4Q9C037 500 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 SEMA4AQ9H3S1 761 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 GGA2Q9UJY4 613 aa12.14□□□□□ -0.47
ALS2CL-206ENST00000434140 GNPATO15228 680 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 CLIC2O15247 247 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 CCND1P24385 295 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 USP11P51784 963 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 TSNAXIP1Q2TAA8 658 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 C6orf118Q5T5N4 469 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 INTUQ9ULD6 942 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 USP15Q9Y4E8 981 aaPredicted RBP12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 WTIPA6NIX2 430 aaPredicted RBP12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 F8W031 263 aaPredicted RBP12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 GNAT1P11488 350 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 MSH2P43246 934 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 ANKRD20A2Q5SQ80 823 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 ERMARDQ5T6L9 678 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 ANKRD20A1Q5TYW2 823 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 ANKRD20A3Q5VUR7 823 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 KIAA1024Q9UPX6 916 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 NPHP3-ACAD11A0A0J9YXS1 232 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 FOXO6A8MYZ6 492 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 PPIP5K2O43314 1243 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 FUT2Q10981 343 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 PLS1Q14651 629 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 GPBP1Q86WP2 473 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 C7orf25Q9BPX7 421 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
ALS2CL-206ENST00000434140 ANKRD62A6NC57 917 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms