RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 CAVIN3Q969G5 261 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 SH3GL2Q99962 352 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 FGFBP2Q9BYJ0 223 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ADAMTS1Q9UHI8 967 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ASTN2O75129 1339 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 RBAK-RBAKDNI3L0D1 243 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KRT14P02533 472 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KRT18P05783 430 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 CARSP49589 748 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KLHL30Q0D2K2 578 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ZCWPW2Q504Y3 356 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 TTMPQ5BVD1 217 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 HERC4Q5GLZ8 1057 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 PPP4R3AQ6IN85 833 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 CCDC65Q8IXS2 484 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 HAS1Q92839 578 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 CUL5Q93034 780 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
SMPD4-206ENST00000433118 ZIM3Q96PE6 472 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 PSMD1Q99460 953 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 FZD1Q9UP38 647 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
SMPD4-206ENST00000433118 MYH4Q9Y623 1939 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 FOCADQ5VW36 1801 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 DGKZQ13574 1117 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 PRAMEF18Q5VWM3 479 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 SAMD7Q7Z3H4 446 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 GMLQ99445 158 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 KRT12Q99456 494 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 NT5C3AQ9H0P0 336 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 TAOK3Q9H2K8 898 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 NYAP2Q9P242 653 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 RNF14Q9UBS8 474 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 A0A087X0T9 212 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 NPHP3-ACAD11A0A0J9YXS1 232 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 WNT10BO00744 389 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 EIF3HO15372 352 aaKnown RBP eCLIP11.56□□□□□ -0.564e-7■□□□□ 8.8
SMPD4-206ENST00000433118 ENTPD3O75355 529 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 FAM228BP0C875 321 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 POLD1P28340 1107 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 TNFRSF8P28908 595 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 HOXA7P31268 230 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-206ENST00000433118 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 PAK2Q13177 524 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 NAB2Q15742 525 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 SLC18A3Q16572 532 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 CCDC174Q6PII3 467 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 SLC30A10Q6XR72 485 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 EFCAB13Q8IY85 973 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 SYN2Q92777 582 aaPredicted RBP11.56□□□□□ -0.56
SMPD4-206ENST00000433118 CEP63Q96MT8 703 aa11.56□□□□□ -0.56
SMPD4-206ENST00000433118 GNA14O95837 355 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 ATP1A2P50993 1020 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 MRPL12P52815 198 aaKnown RBP11.55□□□□□ -0.56
SMPD4-206ENST00000433118 TBC1D10BQ4KMP7 808 aaPredicted RBP11.55□□□□□ -0.56
SMPD4-206ENST00000433118 ARHGAP27Q6ZUM4 889 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 GPBP1Q86WP2 473 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 SH2D3CQ8N5H7 860 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 PACSIN1Q9BY11 444 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 KDM3AQ9Y4C1 1321 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 MYH7BA7E2Y1 1941 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 FAM153BP0C7A2 387 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 PLA2G4BP0C869 781 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 EPB41P11171 864 aaKnown RBP11.55□□□□□ -0.56
SMPD4-206ENST00000433118 BMP3P12645 472 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 ADAM9Q13443 819 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 ASIC2Q16515 512 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 FAM153CQ494X1 144 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 FAM153AQ9UHL3 310 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 MYO3BQ8WXR4 1341 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 POTECB2RU33 542 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 UBXN2AP68543 259 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 PDCLQ13371 301 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 NNTQ13423 1086 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 FOXR2Q6PJQ5 311 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 TRIM59Q8IWR1 403 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 MICALL1Q8N3F8 863 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
SMPD4-206ENST00000433118 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 GRIN2DO15399 1336 aa11.55□□□□□ -0.56
SMPD4-206ENST00000433118 NFKBIEO00221 500 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 CIAPIN1Q6FI81 312 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 PPP1R18Q6NYC8 613 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 KLHL7Q8IXQ5 586 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 TAF4BQ92750 862 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 GDF3Q9NR23 364 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 QSER1Q2KHR3 1735 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 ZEB2O60315 1214 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 MEI1Q5TIA1 1274 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
SMPD4-206ENST00000433118 SLC16A10Q8TF71 515 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms