RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ALG13Q9NP73 1137 aaKnown RBP17■□□□□ 0.31
PRKDC-203ENST00000432581 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
PRKDC-203ENST00000432581 PADI3Q9ULW8 664 aa17■□□□□ 0.31
PRKDC-203ENST00000432581 MRPL42Q9Y6G3 142 aaKnown RBP17■□□□□ 0.31
PRKDC-203ENST00000432581 KAT6AQ92794 2004 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 KDM3AQ9Y4C1 1321 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 SMIM35A0A1B0GVV1 85 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 hCG_1984214I3L0E3 225 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 MBTPS2O43462 519 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 SCG2P13521 617 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 NAPAP54920 295 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 DLX2Q07687 328 aaPredicted RBP16.99■□□□□ 0.31
PRKDC-203ENST00000432581 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
PRKDC-203ENST00000432581 NECTIN1Q15223 517 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 CLUL1Q15846 466 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 CEP55Q53EZ4 464 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 RTN4RL1Q86UN2 441 aaPredicted RBP16.99■□□□□ 0.31
PRKDC-203ENST00000432581 ZNF713Q8N859 430 aaPredicted RBP16.99■□□□□ 0.31
PRKDC-203ENST00000432581 LRRC2Q9BYS8 371 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 GLT8D2Q9H1C3 349 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 IGFLR1Q9H665 355 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 CD207Q9UJ71 328 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 TTC3P53804 2025 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 NLRC5Q86WI3 1866 aa16.99■□□□□ 0.31
PRKDC-203ENST00000432581 TBX10O75333 385 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 ADCY7P51828 1080 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 KRT76Q01546 638 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 TMEM62Q0P6H9 643 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 ADAM15Q13444 863 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 CAMK1Q14012 370 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 RNF20Q5VTR2 975 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 APOA5Q6Q788 366 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 CYP2W1Q8TAV3 490 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 SPPL3Q8TCT6 385 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 TRAPPC12Q8WVT3 735 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 ANO3Q9BYT9 981 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 KCNH6Q9H252 994 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 AGO4Q9HCK5 861 aaKnown RBP16.98■□□□□ 0.31
PRKDC-203ENST00000432581 ANO2Q9NQ90 1003 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 RNF216Q9NWF9 866 aaPredicted RBP16.98■□□□□ 0.31
PRKDC-203ENST00000432581 LRFN2Q9ULH4 789 aa16.98■□□□□ 0.31
PRKDC-203ENST00000432581 CNTNAP5Q8WYK1 1306 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 MEIS1O00470 390 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 CSPG5O95196 566 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 ATG7O95352 703 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 ITGB1P05556 798 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 ARP10275 920 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRKDC-203ENST00000432581 IRS1P35568 1242 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 NDUFV1P49821 464 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 ITGB3BPQ13352 177 aaPredicted RBP16.97■□□□□ 0.31
PRKDC-203ENST00000432581 AP3B2Q13367 1082 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 FAM160B1Q5W0V3 765 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 MTHFD1LQ6UB35 978 aa16.97■□□□□ 0.31
PRKDC-203ENST00000432581 IGKV6D-21A0A0A0MT36 114 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 LINC01565O15544 149 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 HBP1O60381 514 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 DNAJB1P25685 340 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 SREBF1P36956 1147 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 SARSP49591 514 aaKnown RBP16.96■□□□□ 0.31
PRKDC-203ENST00000432581 RTN1Q16799 776 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 PAN2Q504Q3 1202 aaKnown RBP16.96■□□□□ 0.31
PRKDC-203ENST00000432581 HERC4Q5GLZ8 1057 aaPredicted RBP16.96■□□□□ 0.31
PRKDC-203ENST00000432581 ODR4Q5SWX8 454 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 TYW1BQ6NUM6 668 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 NIPA1Q7RTP0 329 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 EFHBQ8N7U6 833 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 KLHL23Q8NBE8 558 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 ATP8B4Q8TF62 1192 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 PGBD1Q96JS3 809 aa16.96■□□□□ 0.31
PRKDC-203ENST00000432581 COL1A2P08123 1366 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 SMCO2A6NFE2 343 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 STXBP3O00186 592 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 BACH1O14867 736 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 ZBTB43O43298 467 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 EYA4O95677 639 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 KLRC1P26715 233 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 ZNF76P36508 570 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 ABHD15Q6UXT9 468 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 MSLNLQ96KJ4 702 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 TMX1Q9H3N1 280 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 C1orf112Q9NSG2 853 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 BARHL2Q9NY43 387 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 PCDHB7Q9Y5E2 793 aa16.95■□□□□ 0.3
PRKDC-203ENST00000432581 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
PRKDC-203ENST00000432581 RPS6KA5O75582 802 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 UBE3AQ05086 875 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 FUT2Q10981 343 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 NFX1Q12986 1120 aaKnown RBP16.94■□□□□ 0.3
PRKDC-203ENST00000432581 COASYQ13057 564 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 TMEM266Q2M3C6 531 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 ZNF484Q5JVG2 852 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 RNF135Q8IUD6 432 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 SMRP1Q8NCR6 262 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 ERVK-5Q9HDB9 667 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 AAASQ9NRG9 546 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 MUTYHQ9UIF7 546 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms