RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 NT5C2P49902 561 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 MBTPS1Q14703 1052 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 TCTN1Q2MV58 587 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 TRIM71Q2Q1W2 868 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 QRICH1Q2TAL8 776 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 CELF3Q5SZQ8 465 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 ADGRF4Q8IZF3 695 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 MICAL1Q8TDZ2 1067 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 EVI5LQ96CN4 794 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 CTAGE1Q96RT6 745 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 USP26Q9BXU7 913 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 RCAN3Q9UKA8 241 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 LRFN2Q9ULH4 789 aa9.08□□□□□ -0.96
ECHDC1-207ENST00000430841 ZMYM6O95789 1325 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 ZNF213O14771 459 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 TREHO43280 583 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 LGALS2P05162 132 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 RPLP2P05387 115 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 STAG3L1P0CL83 205 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 GHRP10912 638 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 UBA1P22314 1058 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 GMPRP36959 345 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 SP4Q02446 784 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 SIGLEC14Q08ET2 396 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 HYAL1Q12794 435 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 NEDD9Q14511 834 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 GPNMBQ14956 572 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 ALX1Q15699 326 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 HSDL1Q3SXM5 330 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 MCMDC2Q4G0Z9 681 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 UTP14CQ5TAP6 766 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 VPS53Q5VIR6 699 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 MYSM1Q5VVJ2 828 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 TAF2Q6P1X5 1199 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 BMP8AQ7Z5Y6 402 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 PRSS33Q8NF86 280 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 WNT8BQ93098 351 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 RPGRIP1Q96KN7 1286 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 ZKSCAN3Q9BRR0 538 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 REPIN1Q9BWE0 567 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 FAM86C1Q9NVL1 165 aa9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 MAP3K20Q9NYL2 800 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 ZFHX2Q9C0A1 2572 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-207ENST00000430841 KAT6AQ92794 2004 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 C5orf67F2Z3F1 127 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 GCOM1H8Y6P7 765 aaPredicted RBP9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 GRM6O15303 877 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 TBX10O75333 385 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 FGAP02671 866 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 POLR2MP0CAP2 368 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 SNHG28P0DPA3 235 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 NOVP48745 357 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 ZXDAP98168 799 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 NAALADL2Q58DX5 795 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 DGKHQ86XP1 1220 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 HOMER1Q86YM7 354 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 SAMD3Q8N6K7 520 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 HPS1Q92902 700 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 TNPO1Q92973 898 aaKnown RBP9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 CUL5Q93034 780 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 PDCD2LQ9BRP1 358 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 CPVLQ9H3G5 476 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 MFSD1Q9H3U5 465 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 DCTPP1Q9H773 170 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 ALG13Q9NP73 1137 aaKnown RBP9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 SETD4Q9NVD3 440 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 PCDHA1Q9Y5I3 950 aa9.06□□□□□ -0.96
ECHDC1-207ENST00000430841 WDFY4Q6ZS81 3184 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 STAM2O75886 525 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 CD2BP2O95400 341 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 HOXA13P31271 388 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 NRIP1P48552 1158 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PPFIA1Q13136 1202 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 COL19A1Q14993 1142 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PGM5Q15124 567 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PAN2Q504Q3 1202 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 IFIT1BQ5T764 474 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 RBM23Q86U06 439 aaKnown RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 KCTD17Q8N5Z5 321 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 EFHBQ8N7U6 833 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 TMEM87AQ8NBN3 555 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 GIMAP8Q8ND71 665 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 TBC1D5Q92609 795 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 P2RX5Q93086 422 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 RILPL2Q969X0 211 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 NEK1Q96PY6 1258 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PHOX2BQ99453 314 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PHF7Q9BWX1 381 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 FTHL17Q9BXU8 183 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 RNPEPQ9H4A4 650 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 TLE6Q9H808 572 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 CNNM2Q9H8M5 875 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 FAM217BQ9NTX9 383 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 NR2E1Q9Y466 385 aa9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 USP15Q9Y4E8 981 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-207ENST00000430841 PCDHB12Q9Y5F1 795 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms