RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ADAT2Q7Z6V5 191 aaKnown RBP7.89□□□□□ -1.15
COL28A1-202ENST00000430711 LENG9Q96B70 501 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 KLRG1Q96E93 195 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 REEP2Q9BRK0 252 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 MAGEF1Q9HAY2 307 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 OSGEPQ9NPF4 335 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 RIC8AQ9NPQ8 531 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 CEP72Q9P209 647 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 FAM169AQ9Y6X4 670 aa7.89□□□□□ -1.15
COL28A1-202ENST00000430711 NRXN2Q9P2S2 1712 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 RBBP6Q7Z6E9 1792 aaKnown RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 TMCO5BA8MYB1 307 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 TISP43B9A030 160 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 C6orf229H3BNL8 230 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 MYO1FO00160 1098 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 EML1O00423 815 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 MEIS2O14770 477 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 NR2F2P24468 414 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 MAGEA9P43362 315 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 EPHB4P54760 987 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 UBXN2AP68543 259 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 HDLBPQ00341 1268 aaKnown RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 LRRC63Q05C16 580 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 SLC18A3Q16572 532 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 QRICH1Q2TAL8 776 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 USH1GQ495M9 461 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 ZC2HC1CQ53FD0 456 aaPredicted RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 DCAF12L1Q5VU92 463 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 SH3BP5LQ7L8J4 393 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 CATSPER3Q86XQ3 398 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 LRRC57Q8N9N7 239 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 BANK1Q8NDB2 785 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 ZSWIM2Q8NEG5 633 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 NOX5Q96PH1 765 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 TSGA10Q9BZW7 698 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 PDGFDQ9GZP0 370 aaPredicted RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 FAM107BQ9H098 131 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 RGL1Q9NZL6 768 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 CWC15Q9P013 229 aaKnown RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 CNOT8Q9UFF9 292 aaKnown RBP7.88□□□□□ -1.15
COL28A1-202ENST00000430711 LEMD3Q9Y2U8 911 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 LY75O60449 1722 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 SCN9AQ15858 1988 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 ZMYM2Q9UBW7 1377 aa7.88□□□□□ -1.15
COL28A1-202ENST00000430711 DDTLA6NHG4 134 aaPredicted RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 KCNK3O14649 394 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 TCP1P17987 556 aaKnown RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PON1P27169 355 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 TMOD1P28289 359 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 HPDP32754 393 aaPredicted RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 FKBP3Q00688 224 aaKnown RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 AMPD3Q01432 767 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 KLHL30Q0D2K2 578 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 ADAM9Q13443 819 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 GIT2Q14161 759 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 QPCTQ16769 361 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 TBC1D10BQ4KMP7 808 aaPredicted RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 DCAF17Q5H9S7 520 aaPredicted RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 AMOTL1Q8IY63 956 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 MICALL1Q8N3F8 863 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 METTL13Q8N6R0 699 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 LNX1Q8TBB1 728 aaPredicted RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 CAVIN3Q969G5 261 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 FAM84AQ96KN4 292 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 RPGRIP1Q96KN7 1286 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 TRIM51Q9BSJ1 452 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 ERVK-5Q9HDB9 667 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 EMILIN3Q9NT22 766 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 TAS2R14Q9NYV8 317 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 WRAP73Q9P2S5 460 aaPredicted RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PCDHA12Q9UN75 941 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 ASTN1O14525 1302 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 ANKRD31Q8N7Z5 1873 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PNMA6FA0A0J9YX94 578 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 SSU72P8A0A1W2PR75 194 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 H0YGN5 161 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 DDX3XO00571 662 aaKnown RBP eCLIP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 GDF11O95390 407 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 SERPING1P05155 500 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 GYS1P13807 737 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PRLRP16471 622 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 GSTO1P78417 241 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PPFIA1Q13136 1202 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PRR16Q569H4 304 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 KIAA1755Q5JYT7 1200 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 CDC42EP5Q6NZY7 148 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 USP38Q8NB14 1042 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PIGOQ8TEQ8 1089 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 LZTS2Q9BRK4 669 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 DHX36Q9H2U1 1008 aaKnown RBP7.87□□□□□ -1.15
COL28A1-202ENST00000430711 PSTPIP2Q9H939 334 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 KCNMB3Q9NPA1 279 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 AMACRQ9UHK6 382 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 GGA1Q9UJY5 639 aa7.87□□□□□ -1.15
COL28A1-202ENST00000430711 TMEM59LQ9UK28 342 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms