RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ZNF200P98182 395 aaPredicted RBP13.97□□□□□ -0.17
USP40-205ENST00000430158 SLC39A14Q15043 492 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 ATP8B4Q8TF62 1192 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 GLG1Q92896 1179 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 VTI1AQ96AJ9 217 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
USP40-205ENST00000430158 HTATIP2Q9BUP3 242 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 TRPV6Q9H1D0 765 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 AZI2Q9H6S1 392 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 TRMT13Q9NUP7 481 aaKnown RBP13.97□□□□□ -0.17
USP40-205ENST00000430158 RGL1Q9NZL6 768 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 TBX21Q9UL17 535 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 ZNF215Q9UL58 517 aaPredicted RBP13.97□□□□□ -0.17
USP40-205ENST00000430158 TET1Q8NFU7 2136 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 MBLAC1A4D2B0 266 aaPredicted RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 BACH1O14867 736 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 B4GALT4O60513 344 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 LYPLA2O95372 231 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 BMP15O95972 392 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 P4HBP07237 508 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 INSRRP14616 1297 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 MARK3P27448 753 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 ANP32AP39687 249 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 GRIN1Q05586 938 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 TRIM71Q2Q1W2 868 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 FAM160B1Q5W0V3 765 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 NCAPH2Q6IBW4 605 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 PDXDC2PQ6P474 469 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 SH3RF1Q7Z6J0 888 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 LINC00301Q8NCQ3 95 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 DHX38Q92620 1227 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 DYDC2Q96IM9 177 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 CHAMP1Q96JM3 812 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 EIF2AK1Q9BQI3 630 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 PDLIM7Q9NR12 457 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
USP40-205ENST00000430158 ATP11BQ9Y2G3 1177 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 SAMM50Q9Y512 469 aa13.96□□□□□ -0.17
USP40-205ENST00000430158 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 TRIM43BA6NCK2 446 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 KIAA0355O15063 1070 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 MARCH6O60337 910 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 PQBP1O60828 265 aaKnown RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 MED24O75448 989 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 ITGB8P26012 769 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 QARSP47897 775 aaKnown RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 PSMC5P62195 406 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 ECM1Q16610 540 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 ANO5Q75V66 913 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 C4orf19Q8IY42 314 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 C7orf31Q8N865 590 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 BBXQ8WY36 941 aaPredicted RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 WNT8BQ93098 351 aa13.95□□□□□ -0.18
USP40-205ENST00000430158 TRIM43Q96BQ3 446 aaPredicted RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 NIFKQ9BYG3 293 aaKnown RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
USP40-205ENST00000430158 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 MROH7Q68CQ1 1323 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 NRCAMQ92823 1304 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 PP2D1A8MPX8 630 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 ZBTB39O15060 712 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 TREHO43280 583 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 HBP1O60381 514 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 OATP04181 439 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 RPA1P27694 616 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 PRKCEQ02156 737 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
USP40-205ENST00000430158 RBL2Q08999 1139 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 CTTNQ14247 550 aaKnown RBP13.94□□□□□ -0.18
USP40-205ENST00000430158 GRIK4Q16099 956 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 ATL3Q6DD88 541 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 DTHD1Q6ZMT9 781 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 SERINC5Q86VE9 423 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 CATSPER3Q86XQ3 398 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 ATP6V0A1Q93050 837 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 LXNQ9BS40 222 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 TCEAL9Q9UHQ7 104 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
USP40-205ENST00000430158 C17orf102A2RUQ5 167 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 TMEM150BA6NC51 233 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 RRN3P2A6NIE6 340 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 DCDC2CA8MYV0 355 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 YEATS4O95619 227 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 CLTBP09497 229 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 CYP2C9P11712 490 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
USP40-205ENST00000430158 CDC25AP30304 524 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 CHMP4BP1P59074 171 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 NUCB2P80303 420 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
USP40-205ENST00000430158 PTGISQ16647 500 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 XKR3Q5GH77 459 aa13.93□□□□□ -0.18
USP40-205ENST00000430158 FAM47CQ5HY64 1035 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms