RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
RPE-206ENST00000429921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.17□□□□□ -0.62
RPE-206ENST00000429921 CD2APQ9Y5K6 639 aa11.17□□□□□ -0.62
RPE-206ENST00000429921 ZBED4O75132 1171 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 AKAP3O75969 853 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 RPS12P25398 132 aaKnown RBP11.16□□□□□ -0.62
RPE-206ENST00000429921 CYP2J2P51589 502 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 NPEPPSP55786 919 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 MTMR1Q13613 665 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 TRIM14Q14142 442 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 KNOP1Q1ED39 458 aaKnown RBP11.16□□□□□ -0.62
RPE-206ENST00000429921 CCDC122Q5T0U0 273 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ARHGEF16Q5VV41 709 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 C1orf186Q6ZWK4 172 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ZNF280CQ8ND82 737 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ZSWIM2Q8NEG5 633 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ELMO3Q96BJ8 720 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ERGIC2Q96RQ1 377 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 PCIF1Q9H4Z3 704 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ZNHIT6Q9NWK9 470 aaKnown RBP11.16□□□□□ -0.62
RPE-206ENST00000429921 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 USO1O60763 962 aaKnown RBP11.16□□□□□ -0.62
RPE-206ENST00000429921 NOL4O94818 638 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 PRKAR2AP13861 404 aaKnown RBP11.16□□□□□ -0.62
RPE-206ENST00000429921 ZBED6P86452 979 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 GFPT1Q06210 699 aaPredicted RBP11.16□□□□□ -0.62
RPE-206ENST00000429921 KCNH2Q12809 1159 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 PPP2R5CQ13362 524 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 PGM5Q15124 567 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 COBLL1Q53SF7 1204 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 NEK11Q8NG66 645 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 ASTN1O14525 1302 aa11.16□□□□□ -0.62
RPE-206ENST00000429921 FRMD3A2A2Y4 597 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 DHX15O43143 795 aaKnown RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 RRP9O43818 475 aaKnown RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 HIP1RO75146 1068 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 TMEM132BQ14DG7 1078 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 PTPROQ16827 1216 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 KCTD19Q17RG1 926 aaPredicted RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 ODR4Q5SWX8 454 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 CAPZA3Q96KX2 299 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 PSMB7Q99436 277 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 PDCL3Q9H2J4 239 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 AGO4Q9HCK5 861 aaKnown RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 USP20Q9Y2K6 914 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 CENPFP49454 3210 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 ARHGEF35A5YM69 484 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 CETN3O15182 167 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 TGFB1I1O43294 461 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 FGFR1OPO95684 399 aaKnown RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 NR3C1P04150 777 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 FECHP22830 423 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 PPP1R2P41236 205 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 DNA2P51530 1060 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 TDRD12Q587J7 1177 aaKnown RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 TREML2Q5T2D2 321 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 MCTP2Q6DN12 878 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 LPAR1Q92633 364 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 JAKMIP2Q96AA8 810 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 CCDC42Q96M95 316 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 KIFC3Q9BVG8 833 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 DEF6Q9H4E7 631 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 AJAP1Q9UKB5 411 aaPredicted RBP11.15□□□□□ -0.62
RPE-206ENST00000429921 MRFAP1Q9Y605 127 aa11.15□□□□□ -0.62
RPE-206ENST00000429921 PLA2G6O60733 806 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 LRRN2O75325 713 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
RPE-206ENST00000429921 SEC31AO94979 1220 aaKnown RBP11.14□□□□□ -0.63
RPE-206ENST00000429921 CCNE2O96020 404 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 PADI6Q6TGC4 694 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 EPM2AIP1Q7L775 607 aaPredicted RBP11.14□□□□□ -0.63
RPE-206ENST00000429921 ZNF397Q8NF99 534 aaPredicted RBP11.14□□□□□ -0.63
RPE-206ENST00000429921 BAP1Q92560 729 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 GOLGA6L9A6NEM1 432 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 AKR1B10O60218 316 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 ATP1A1P05023 1023 aaKnown RBP11.14□□□□□ -0.63
RPE-206ENST00000429921 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 EPHA7Q15375 998 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 FAM178BQ8IXR5 827 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 DAW1Q8N136 415 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 FAM133AQ8N9E0 248 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 UBXN4Q92575 508 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 KLRG1Q96E93 195 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 FAM84AQ96KN4 292 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 NACC1Q96RE7 527 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.14□□□□□ -0.63
RPE-206ENST00000429921 NUP58Q9BVL2 599 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 TUFT1Q9NNX1 390 aa11.14□□□□□ -0.63
RPE-206ENST00000429921 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms