RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
ATG4B-211ENST00000429899 POMKQ9H5K3 350 aa11.62□□□□□ -0.55
ATG4B-211ENST00000429899 GPCPD1Q9NPB8 672 aa11.62□□□□□ -0.55
ATG4B-211ENST00000429899 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATG4B-211ENST00000429899 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 B4DLN1 442 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 STK25O00506 426 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 FGRP09769 529 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 GHRP10912 638 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 GATMP50440 423 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 MRPL12P52815 198 aaKnown RBP11.61□□□□□ -0.55
ATG4B-211ENST00000429899 ANTXR2P58335 489 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 ERVFC1P60507 584 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 DMWDQ09019 674 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 FAM26DQ5JW98 314 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 MYSM1Q5VVJ2 828 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 TMEM184AQ6ZMB5 413 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 HSCBQ8IWL3 235 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 DCAF4Q8WV16 495 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 ERVK-5Q9HDB9 667 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 NCDNQ9UBB6 729 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 LIMD1Q9UGP4 676 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 CYP46A1Q9Y6A2 500 aa11.61□□□□□ -0.55
ATG4B-211ENST00000429899 EVPLQ92817 2033 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 K7ELQ4 463 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 CAND2O75155 1236 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 PCP11498 1178 aaKnown RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 AK2P54819 239 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 EXOSC10Q01780 885 aaKnown RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 SP2Q02086 613 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 BECN1Q14457 450 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 STXBP2Q15833 593 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 USH1GQ495M9 461 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 RTN4RL1Q86UN2 441 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 CMTR2Q8IYT2 770 aaKnown RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 SIX5Q8N196 739 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 NCOA7Q8NI08 942 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 CDCA3Q99618 268 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-211ENST00000429899 AGXT2Q9BYV1 514 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 BCAS3Q9H6U6 928 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 EHMT1Q9H9B1 1298 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 SETD4Q9NVD3 440 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 FBXL21Q9UKT6 434 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 MRVI1Q9Y6F6 885 aa11.6□□□□□ -0.55
ATG4B-211ENST00000429899 ZZEF1O43149 2961 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 FSD2A1L4K1 749 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 H3BRB1 525 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 ORC4O43929 436 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 NOVP48745 357 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 MCM2P49736 904 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 TOB2Q14106 344 aaPredicted RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 LPIN1Q14693 890 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 DHX32Q7L7V1 743 aaKnown RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 FBXL16Q8N461 479 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 TDRD5Q8NAT2 981 aaKnown RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 SUMF1Q8NBK3 374 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 NSUN6Q8TEA1 469 aaKnown RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 TCEANC2Q96MN5 208 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 SPATA33Q96N06 139 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 RTKNQ9BST9 563 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 RNF41Q9H4P4 317 aaPredicted RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 TUT1Q9H6E5 874 aaKnown RBP11.59□□□□□ -0.55
ATG4B-211ENST00000429899 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 DOCK8Q8NF50 2099 aa11.59□□□□□ -0.55
ATG4B-211ENST00000429899 CEP295Q9C0D2 2601 aa11.58□□□□□ -0.55
ATG4B-211ENST00000429899 SPEGQ15772 3267 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 TSPY2A6NKD2 308 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 B4E1Z4 1266 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 WEE2P0C1S8 567 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 SP9P0CG40 484 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 EIF2AK2P19525 551 aaKnown RBP11.58□□□□□ -0.56
ATG4B-211ENST00000429899 RFX1P22670 979 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 ADAM17P78536 824 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 PPM1JQ5JR12 505 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 SPECC1Q5M775 1068 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 CELF3Q5SZQ8 465 aaKnown RBP11.58□□□□□ -0.56
ATG4B-211ENST00000429899 CES5AQ6NT32 575 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 CYB5R4Q7L1T6 521 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
ATG4B-211ENST00000429899 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 IWS1Q96ST2 819 aa11.58□□□□□ -0.56
ATG4B-211ENST00000429899 PRR5-ARHGAP8B1AHC4 643 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 FSCN2O14926 492 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 PRC1O43663 620 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 EIF3JO75822 258 aaKnown RBP11.57□□□□□ -0.56
ATG4B-211ENST00000429899 LARGE1O95461 756 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 GGPS1O95749 300 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 LGALS2P05162 132 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 KCNA4P22459 653 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 MCM5P33992 734 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 NT5C2P49902 561 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 ARHGAP8P85298 464 aa11.57□□□□□ -0.56
ATG4B-211ENST00000429899 MGAT3Q09327 533 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms