RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	ATG7	O95352	703 aa		20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	FAM86B2	P0C5J1	330 aa		20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	ACTR2	P61160	394 aa		20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	RUFY4	Q6ZNE9	571 aa		20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	TMEM192	Q8IY95	271 aa		20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	CCDC12	Q8WUD4	166 aa	Predicted RBP	20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	PABPC5	Q96DU9	382 aa	Known RBP	20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	TM6SF1	Q9BZW5	370 aa		20.2	■□□□□ 0.82
MRPL28-203	ENST00000429738	IGLV3-22	A0A075B6J6	115 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	UPP2	O95045	317 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	CHRNA1	P02708	482 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	MGAT3	Q09327	533 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	COL19A1	Q14993	1142 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	MCTP2	Q6DN12	878 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	PLPPR4	Q7Z2D5	763 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	C6orf50	Q9HD87	102 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	TUBE1	Q9UJT0	475 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	FAM50B	Q9Y247	325 aa		20.19	■□□□□ 0.82
MRPL28-203	ENST00000429738	IGKV6D-21	A0A0A0MT36	114 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	POTEB3	A0JP26	581 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	DHX15	O43143	795 aa	Known RBP	20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	GNA11	P29992	359 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	CSPP1	Q1MSJ5	1256 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	TCEAL5	Q5H9L2	206 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	POTEB	Q6S5H4	581 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	ALYREF	Q86V81	257 aa	Known RBP	20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	REXO1	Q8N1G1	1221 aa	Known RBP	20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	APBB2	Q92870	758 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	UIMC1	Q96RL1	719 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	AZI2	Q9H6S1	392 aa		20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	NCOA5	Q9HCD5	579 aa	Known RBP	20.18	■□□□□ 0.82
MRPL28-203	ENST00000429738	RRN3P2	A6NIE6	340 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	DCX	O43602	365 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	CCNE2	O96020	404 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	INSRR	P14616	1297 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	ZNF76	P36508	570 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	CCT2	P78371	535 aa	Known RBP	20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	PLCB4	Q15147	1175 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	PLA2G4D	Q86XP0	818 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	SLC26A6	Q9BXS9	759 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	IFIH1	Q9BYX4	1025 aa	Known RBP	20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	NSUN3	Q9H649	340 aa	Known RBP	20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	PRKAG3	Q9UGI9	489 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	CYP46A1	Q9Y6A2	500 aa		20.17	■□□□□ 0.82
MRPL28-203	ENST00000429738	COL4A6	Q14031	1691 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	WDR81	Q562E7	1941 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	NCK2	O43639	380 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	PPFIA3	O75145	1194 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	CIITA	P33076	1130 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	STAT5B	P51692	787 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	AKAP17A	Q02040	695 aa	Known RBP	20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	ERICH6B	Q5W0A0	696 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	ABHD15	Q6UXT9	468 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	EP400NL	Q6ZTU2	488 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	CCDC148	Q8NFR7	591 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	ZNF274	Q96GC6	653 aa	Predicted RBP	20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	SH3GLB2	Q9NR46	395 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	PPP4R2	Q9NY27	417 aa		20.16	■□□□□ 0.82
MRPL28-203	ENST00000429738	LOXHD1	Q8IVV2	1947 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	MYH9	P35579	1960 aa	Known RBP	20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	C19orf67	A6NJJ6	358 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	EDIL3	O43854	480 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	RPLP2	P05387	115 aa	Known RBP	20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	SLC26A2	P50443	739 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	SET	Q01105	290 aa	Predicted RBP	20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	ZP2	Q05996	745 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	RSPH3	Q86UC2	560 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	BICD2	Q8TD16	824 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	DNAJB3	Q8WWF6	145 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	TNPO1	Q92973	898 aa	Known RBP	20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	ZBTB10	Q96DT7	871 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	IL17RA	Q96F46	866 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	VPS54	Q9P1Q0	977 aa		20.15	■□□□□ 0.82
MRPL28-203	ENST00000429738	NLRC5	Q86WI3	1866 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	IPO5	O00410	1097 aa	Known RBP	20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	RB1	P06400	928 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	GHR	P10912	638 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	IGBP1	P78318	339 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	LPIN1	Q14693	890 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	CCDC60	Q8IWA6	550 aa	Predicted RBP	20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	FIBCD1	Q8N539	461 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	RASGRP4	Q8TDF6	673 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	LENG9	Q96B70	501 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	UPF3B	Q9BZI7	483 aa	Known RBP	20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	CLDND1	Q9NY35	253 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	TRPC6	Q9Y210	931 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	PCDHA2	Q9Y5H9	948 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	CDY2A	Q9Y6F7	541 aa		20.14	■□□□□ 0.81
MRPL28-203	ENST00000429738	C5orf67	F2Z3F1	127 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	DDX39A	O00148	427 aa	Known RBP	20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	LTBR	P36941	435 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	FBXO47	Q5MNV8	452 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	ADHFE1	Q8IWW8	467 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	ZNF577	Q9BSK1	485 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	TBC1D22B	Q9NU19	505 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	TTC3	P53804	2025 aa		20.13	■□□□□ 0.81
MRPL28-203	ENST00000429738	EVPL	Q92817	2033 aa		20.12	■□□□□ 0.81
MRPL28-203	ENST00000429738	RALGAPA2	Q2PPJ7	1873 aa		20.12	■□□□□ 0.81
MRPL28-203	ENST00000429738	BMPR1A	P36894	532 aa		20.12	■□□□□ 0.81

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms