RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TEKT2Q9UIF3 430 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 SMIM23A6NLE4 172 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TMEM110-MUSTN1A8MSY1 372 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 P4HA2O15460 535 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PDE5AO76074 875 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 GFPT2O94808 682 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TMEM110Q86TL2 294 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 JADE3Q92613 823 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 OTUD5Q96G74 571 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PDS5AQ29RF7 1337 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 R3HDM1Q15032 1099 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 GSDMBQ8TAX9 411 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 EDC3Q96F86 508 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PLIN2Q99541 437 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ARHGAP42A6NI28 874 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 HSPD1P10809 573 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 GSTO1P78417 241 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CNGA3Q16281 694 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT80Q6KB66 452 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 SPATA5Q8NB90 893 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ROPN1BQ9BZX4 212 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ROPN1Q9HAT0 212 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 RABGEF1Q9UJ41 708 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ABCB11O95342 1321 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 SERPINB1P30740 379 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PPARGP37231 505 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CD151P48509 253 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 LONRF3Q496Y0 759 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TBC1D10BQ4KMP7 808 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 OTUD7BQ6GQQ9 843 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 SV2BQ7L1I2 683 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CDCA5Q96FF9 252 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PFDN4Q9NQP4 134 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 EIF4A1P60842 406 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 ABTB1Q969K4 478 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 MID2Q9UJV3 735 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 KCNJ18B7U540 433 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 BCRP11274 1271 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 KCNJ12Q14500 433 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 PUM3Q15397 648 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 IRGQQ8WZA9 623 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 IL17RAQ96F46 866 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 MFAP3LO75121 409 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 ATP6V1C1P21283 382 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 RFX1P22670 979 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 DNAJC3Q13217 504 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 RBM20Q5T481 1227 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 SYDE1Q6ZW31 735 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 NOSTRINQ8IVI9 506 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 ZKSCAN4Q969J2 545 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 SDCCAG3Q96C92 435 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 ZNF594Q96JF6 807 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 MAGED4Q96JG8 741 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 GOLPH3LQ9H4A5 285 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 SH3TC1Q8TE82 1336 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 PDIA3P30101 505 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 TFAP4Q01664 338 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 ORC2Q13416 577 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 BEND3Q5T5X7 828 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 ZNF662Q6ZS27 426 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 EHMT1Q9H9B1 1298 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 TRPC7Q9HCX4 862 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 MCM9Q9NXL9 1143 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 COPG1Q9Y678 874 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 SCTRP47872 440 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 MORC3Q14149 939 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 CCDC25Q86WR0 208 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 RBBP8NLQ8NC74 664 aaPredicted RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 EYA2O00167 538 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 MBD4O95243 580 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 PDE4DQ08499 809 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 PI4K2BQ8TCG2 481 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 BRD8Q9H0E9 1235 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 WDR17Q8IZU2 1322 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 WDR46O15213 610 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 PRPF3O43395 683 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 RNASE9P60153 205 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT40Q6A162 431 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 DIS3L2Q8IYB7 885 aaKnown RBP8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 FUKQ8N0W3 1084 aa8.09□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT8P05787 483 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 COPB2P35606 906 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 TTC38Q5R3I4 469 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 PIK3AP1Q6ZUJ8 805 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 PEX26Q7Z412 305 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 EAF2Q96CJ1 260 aaPredicted RBP8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 QKIQ96PU8 341 aaKnown RBP eCLIP8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 MTRQ99707 1265 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 C6orf50Q9HD87 102 aa8.09□□□□□ -1.12
SYNPO2-202ENST00000429713 CES2O00748 559 aa8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 SEC31AO94979 1220 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 DHX34Q14147 1143 aaKnown RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 DCAF17Q5H9S7 520 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 ZNF184Q99676 751 aaPredicted RBP8.08□□□□□ -1.12
SYNPO2-202ENST00000429713 KIF11P52732 1056 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms